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Information for unigene UN80324
FASTA Sequence |
Unigene ID: UN80324 | Length: 667 |
SSR | | GGGAGGCGGACCAATTCGGAGAGAGAGAGCGACGGAGATGGTTTTTGTTTGACATTTTTCGAAAACCGAGATTATTTTTTGTTGTT
GTTGTTGTTGTGTGTTCCCTCCGATCGAGGCAATGCCCTAACTGTCGTAATGTTGAAAACGGTCAGTGGCTATTTGCCAATGCTTC
TTCTACTCGTCTTTTTCCTGAGTTTGTCATGGAAGATTGGATCCCTGATGAAGATTTGTATGCTTTAAGCTACCCTGAAATGCAAT
ATCGGGTCCATTGGTGCCCCTTTGGTGAGCTCTCTCAAGCTGCTTCATTCGATGATGATGATCGTAACAACCAATCGACGGCACAT
GTCCGTGGAAAACGCGGGAACAAAGAGGAGGAGGAGGAGGATTCTTCTACTCTTGTTGAAATCTCGTGCTCGATATGCCTCGAGTT
GGTGATCGACGACGGTTCCAGATCCATGGCTAAGCTCCAATGTGGTCACCAATTCCATTTGGACTGCATCGGATCCGCTTTCAACA
TTAAAGGAACCATGCAATGACCACTTCCACCAGCTCTCTGTTGCTCCCCACTATCACCATCACCATCACCATCATCATTCTACATC
GTTTTCTCTTCCAGCTGCTCATGTAATTGATGGTGAAATCGACTCTTCAGCAACACGGGCATTTC
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GenBank top hits (Blast detail) | Score | e value |
NP_850478 RING/U-box domain-containing protein [Arabidopsis thaliana] | 307 | 3e-026 |
XP_002882128 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 305 | 5e-026 |
XP_002523069 DNA binding protein, putative [Ricinus communis] | 259 | 1e-020 |
ACJ84306 unknown [Medicago truncatula] | 228 | 4e-017 |
XP_002268579 PREDICTED: hypothetical protein [Vitis vinifera] | 227 | 5e-017 |
Swiss-Prot top hits | Score | e value |
No hits found | | |
TrEMBL top hits (Blast detail) | Score | e value |
O82239 At2g47700 | 307 | 2e-026 |
B9SAQ0 DNA binding protein, putative | 259 | 7e-021 |
B7FHS7 Putative uncharacterized protein | 228 | 3e-017 |
B9I7H8 Predicted protein (Fragment) | 227 | 4e-017 |
B9N4J3 Predicted protein | 227 | 4e-017 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G47700.1 zinc finger (C3HC4-type RING finger) family protein | 307 | 1e-028 |
AT3G05545.1 transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein | 224 | 6e-019 |
AT4G13490.1 zinc finger (C3HC4-type RING finger) family protein | 139 | 4e-009 |
AT2G15260.1 zinc finger (C3HC4-type RING finger) family protein | 124 | 2e-007 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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Unigene Members | |
![](/radish/tmp/UN80324.png) |
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