Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN80367

FASTA Sequence
Unigene ID: UN80367Length: 583 SSR 
GGGCCTTCCACCGCGTGATCCCGAAGTTCATGTGCCAGGGAGGAGATTTCACCGCCGGGAACGGGACCGGGGGAGAGTCGATCTAC
GGCATGAAGTTCAAGGACGAGAACTTTGTCAAGAAACACACCGGTCCGGGCATCCTGTCCATGGCCAACGCTGGTCCGAACACGAA
CGGATCTCAGTTTTTCATCTGCACTGAGAAGACGTCGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAGGTTGTCGAAGGGATGG
ATGTCGTTAGGAACATTGAGAAGGTTGGATCTGACAGTGGAAGGACCTCGAAGAAGGTTGTGATCGCTGACTGTGGTCAGCTTTAG
ATCTGGTGAGAGAAAAGTGAGAGAGAGAGACAGAGGCTTTGCCACAAGGAATAATGAATAAAGTAGAGAGTTTGTTTTACTTTTTC
GTCATGCTTTTTGTATGAATCAAAAGAGTGACGTCATGAGTCCTCTGAGAACGATCGCCATGAGATCGTAGTACTTTTAGCATCAT
CGCTCTTGTAATTCGTCCTTTGGGAGATTTCGTACTTGTTCTCTTGTAAAAGCGTTTATTAAGGAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
P24525 RecName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Cyclophilin; AltName: Full=Cyclosporin A-binding protein; AltName: Full=Rotamase5788e-058
AAA62706 cyclophilin [Brassica napus]5788e-058
XP_002884009 hypothetical protein ARALYDRAFT_899976 [Arabidopsis lyrata subsp. lyrata]5681e-056
AAR27291 cyclophilin [Eutrema halophilum]5671e-056
NP_179251 Peptidyl-prolyl cis-trans isomerase CYP19-1 [Arabidopsis thaliana]5662e-056

Swiss-Prot top hits (Blast detail)Scoree value
P24525 Peptidyl-prolyl cis-trans isomerase5784e-059
Q38900 Peptidyl-prolyl cis-trans isomerase CYP19-15661e-057
Q39613 Peptidyl-prolyl cis-trans isomerase5462e-055
P34887 Peptidyl-prolyl cis-trans isomerase5444e-055
Q8W171 Peptidyl-prolyl cis-trans isomerase 15363e-054

TrEMBL top hits (Blast detail)Scoree value
Q6TMX3 Peptidyl-prolyl cis-trans isomerase5671e-056
Q96416 Peptidyl-prolyl cis-trans isomerase5526e-055
Q96417 Peptidyl-prolyl cis-trans isomerase5501e-054
C7EW65 Peptidyl-prolyl cis-trans isomerase5445e-054
Q52UN0 Peptidyl-prolyl cis-trans isomerase5428e-054

Arabidopsis top hits (Blast detail)Scoree value
AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase5661e-058
AT4G34870.1 ROC5 (ROTAMASE CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase5292e-054
AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase5193e-053
AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase5103e-052
AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase4971e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members