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Information for unigene UN80390
| FASTA Sequence |
| Unigene ID: UN80390 | Length: 384 |
SSR | | AGGACTCACTTGACTATTCTCACATTCAGAACTTTGCTATCTCTCTCTCTCGACCACATCGCCATGGCTGACAAGAAGATTAAGAT
CGGAATCAACGGTTTCGGAAGAATCGGTCGTTTGGTGGCGAGAGTTATCCTTCAGAGGAACGATGTTGAGCTCGTCGCTGTTAACG
ATCCTTTCACCACCACCGAGTACATGACATACATGTTTAAGTACGACAGTGTTCACGGACAGTGGAAGCACAATGAGCTTAAGATA
AAGGATGAGAAAACCCTTCTCTTTGGTGAGAAACCAGTCACTGTTTTTGGCATCAGGAACCCTGAGGATATCCCATGGGGTGAGGC
TGGTGCTGACTTTGTTGTTGAGTCTACTGGTGTCTTCACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| P04796 RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 557 | 9e-056 |
| XP_002882331 glyceraldehyde-3-phosphate dehydrogenase C subunit [Arabidopsis lyrata subsp. lyrata] | 543 | 4e-054 |
| NP_187062 glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Arabidopsis thaliana] | 540 | 9e-054 |
| NP_172801 glyceraldehyde 3-phosphate dehydrogenase [Arabidopsis thaliana] | 540 | 9e-054 |
| AAA32794 cystolic glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] | 540 | 9e-054 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P04796 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 557 | 3e-057 |
| P25858 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 540 | 3e-055 |
| P26518 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 510 | 9e-052 |
| P26520 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 499 | 2e-050 |
| P26521 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 493 | 9e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z2I0 AT1G13440 protein (Fragment) | 540 | 6e-054 |
| Q0WVE7 Glyceraldehyde-3-phosphate dehydrogenase C subunit | 540 | 6e-054 |
| Q8LAS0 Glyceraldehyde-3-phosphate dehydrogenase C subunit (GapC) | 540 | 6e-054 |
| Q9FX54 At1g13440/F13B4_8 | 540 | 6e-054 |
| B9DGZ4 AT1G13440 protein | 537 | 1e-053 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13440.1 GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 540 | 4e-056 |
| AT1G13440.2 GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 540 | 4e-056 |
| AT3G04120.1 GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1); glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 540 | 4e-056 |
| AT1G16300.1 GAPCP-2; NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 309 | 3e-029 |
| AT1G79530.1 GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 308 | 3e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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