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Information for unigene UN80397
| FASTA Sequence |
| Unigene ID: UN80397 | Length: 730 |
SSR | | GAGTTTGAAATTTCAAACAACTTGAAGATTAAAAAAAATATATATGCTATAAGTTTTTAACCTCTCACCGTTTAAGGGTGCTGGTA
GGACATCTGGGAAATCAAATCTACTAAATTCTCCAGGTTTACTTGGCATGGCGAATATCATGGAGTGTTCCTTCCACTGCAACCGA
TCATTGATCCCAAGTTCTCCAAATAAGTTTTGCACATTAGGATAAGCTCCAACCTTCAACCACCAAGTATATGAAAAGAGTCAAGG
AAACAAAAAAGAGAGTCAATAACTTCACTTAGGAAAAGAATTAACAGGAAACTTTGTTGACCATTAGTTGTTTTACAACTTTCTCA
ATGAGCATATTTGAAACGGTGTGCAAAATTATAAAGGTCCGAGAATCCTTGAGGCTATCATATTCAAATATAATTGCAAATGCTCT
ACTAAAAAGAATAACTTATTCAGCTATACATGATAAGAACACATATTGGTAAATCACATGTAAATTCAAATCCAAGTTTATGAAAT
TGAGGAAATATACATACATTGGAGGAGCAACGCCAGAGATAATGAATTTTTGTAACTTACAAAATATATGTAAACCGGTTTCGTAC
CAATCTCCATCTTCATCCTTCCATGCAGCTATCTGGAGGAACACATACTTCACATCCTTAATAGATGATATATCATAATAATAATA
ATAATCTCACCTAAAAGCCAGAGACACACAATAACAATGTAA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_193157 phytoene dehydrogenase [Arabidopsis thaliana] | 285 | 1e-023 |
| NP_974545 phytoene dehydrogenase [Arabidopsis thaliana] | 285 | 1e-023 |
| AAL15300 AT4g14210/dl3145c [Arabidopsis thaliana] | 285 | 1e-023 |
| ABV46593 phytoene desaturase [Brassica oleracea var. botrytis] | 285 | 1e-023 |
| BAG68955 phytoene desaturase [Brassica napus] | 285 | 1e-023 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q07356 Phytoene dehydrogenase, chloroplastic/chromoplastic | 285 | 6e-025 |
| Q40406 Phytoene dehydrogenase, chloroplastic/chromoplastic | 278 | 4e-024 |
| A2XDA1 Phytoene dehydrogenase, chloroplastic/chromoplastic | 273 | 1e-023 |
| Q0DUI8 Phytoene dehydrogenase, chloroplastic/chromoplastic | 273 | 1e-023 |
| P80093 Phytoene dehydrogenase, chloroplastic/chromoplastic | 271 | 2e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B2X8P6 Phytoene desaturase | 285 | 9e-024 |
| B5BUY2 Phytoene desaturase (Fragment) | 285 | 9e-024 |
| B9VUW2 Chromoplast phytoene desaturase | 285 | 9e-024 |
| C5H4P5 PDS | 285 | 9e-024 |
| C7DR84 Chloroplast phytoene desaturase | 285 | 9e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G14210.1 PDS3 (PHYTOENE DESATURASE 3); phytoene dehydrogenase | 285 | 5e-026 |
| AT4G14210.2 PDS3 (PHYTOENE DESATURASE 3); phytoene dehydrogenase | 285 | 5e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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