 |
Information for unigene UN80409
| FASTA Sequence |
| Unigene ID: UN80409 | Length: 708 |
SSR | | GGGACCAAAATAAGAAATTAGGTTAGCAATCATCCCCCAATTCTTCTTCCCTCGCGATCGGTGCCCTGTTCATCTTCCGTCCTGTG
GATCGTGATCTCACGGTTGAAGCCAACCTTACTGCCTCGGAGTCACTACATGTCTCTCTCTCTCCGTCTTTTCGTCAAACCCATCT
CTGATACATCACAGAACGCAAGCGCAGCAGGGATTGGTGGAAGCAACGATGGGTGTATCAAACAAATGATGGAACTGCAACTACGT
CTGAAGATTTAAAGGAGAATCTGAACCAATTCATAAACTCTATTCAGAAGACTTTGGGACTCCTTCATCAGTTACGCCTTACTGTC
TCTTCTTTCACACCCGCCTTGTCAGCCTCAACTCTCTCGTGTCGGAGCTGAATAGCATGGCTATGTTGTCCGAGAAATGCAACATT
CAAGTCCCCATGGAAGTTCTTTGTTTGATTGACGATGGAAAGAACCCGGACGAGTTTACAAGCAAGGGATGTTATTAATAGCTGCA
TCAAGTTACAAAAGGCAAAACTGATGCTTTTAAGGTTACTTCTTCTTTTCTCTTTTTTTTTTTTTTGTTTACTCAGATTTTGTTTT
TATGAATAGGATTTGAGAAAACATATTCTGGAGGAGCTTGAAGAGACTTTCCCTGATGAAGTTGATAAGTATAGAGAGATCCGTGC
TGCTTCTGCGGCTGAAGCGA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893389 T24P13.4 [Arabidopsis lyrata subsp. lyrata] | 204 | 3e-014 |
| NP_199006 Mediator complex, subunit Med10 [Arabidopsis thaliana] | 203 | 4e-014 |
| NP_973916 Mediator complex, subunit Med10 [Arabidopsis thaliana] | 203 | 4e-014 |
| AAF87025 T24P13.4 [Arabidopsis thaliana] | 203 | 4e-014 |
| NP_564254 Mediator complex, subunit Med10 [Arabidopsis thaliana] | 203 | 4e-014 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3ED58 Putative uncharacterized protein At1g26665.2 | 203 | 3e-014 |
| Q93WN1 At1g26660/T24P13_4 | 203 | 3e-014 |
| Q9FHZ2 Genomic DNA, chromosome 5, P1 clone:MJC20 | 203 | 3e-014 |
| Q9LQY6 T24P13.4 | 203 | 3e-014 |
| B9SPF4 Nut2, putative | 198 | 1e-013 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G26665.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | 203 | 2e-016 |
| AT1G26665.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | 203 | 2e-016 |
| AT5G41910.1 RNA polymerase II mediator complex protein-related | 203 | 2e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
