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Information for unigene UN80424
| FASTA Sequence |
| Unigene ID: UN80424 | Length: 668 |
SSR | | GGAAGGTATGAATCTCTTCTCTCTCTCTCTGTCTCTTCACTGTCTTTTACGGTTCACAACGAGAATTGAATATAAAGGTCTAAACT
TTGGGCGGAGAAAGTAAATGGGTTACTGTGTTTTATGTGCAAATCTGGGTGGAATCTAACTAATTTGACTGATAGCAGAAATGGCG
GCGACACAACTCACAGCATCACCAGTGACCGTGTCAGCCAGGAGCTTAGCCTCACTGGATGGTCTCAGAGCTTCGAGTGTCATCAA
GTTTGGAACTTTGAAACCAGGGACCCTTAAGCAGAGCCAGTTCCGTTCTTTGGTTGTCAGGGCTGCTTCTGTCGTTGCTCCTAAGT
ATACTTCAATTAAGCCACTGGGAGATAGAGTTTTGGTGAAGATCAAGGAGGCAGAGGAAAAGACTATGGGAGGTATCTTACTTCCA
TCCACTGCTCAATCAAAGCCTCAAGGAGGTGAAGTCATTGCTGTAGGTGAAGGAAGAACTATTGGGAAGACCAAAGTTGATATCAC
TATCCCTACTGGAGCACAAATCATTTACTCCAAGTACGCAGGCACTGAGGTGGAGTTCAACGATGTGAAGCATCTCATTCTCAAGG
AAGTTGACATTGTTGGTCTTCTTGAGACAGAGGACATCAAAGATCTCAAGCCCTGAATGACCGTGT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_197572 chaperonin 20 [Arabidopsis thaliana] | 728 | 4e-075 |
| AAM77651 cp10-like protein [Gossypium hirsutum] | 611 | 2e-061 |
| XP_002516232 groes chaperonin, putative [Ricinus communis] | 596 | 9e-060 |
| XP_002326137 predicted protein [Populus trichocarpa] | 572 | 5e-057 |
| ABK96728 unknown [Populus trichocarpa x Populus deltoides] | 568 | 2e-056 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O65282 20 kDa chaperonin, chloroplastic | 728 | 2e-076 |
| Q02073 20 kDa chaperonin, chloroplastic | 432 | 4e-042 |
| B0KBR4 10 kDa chaperonin | 262 | 2e-022 |
| B0K3P5 10 kDa chaperonin | 262 | 2e-022 |
| Q60023 10 kDa chaperonin | 261 | 3e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LK52 Cp10-like protein | 611 | 1e-061 |
| B9RR63 Groes chaperonin, putative | 596 | 6e-060 |
| A9PIF1 Predicted protein | 572 | 4e-057 |
| A9PK25 Putative uncharacterized protein | 568 | 1e-056 |
| B4UW54 GroES-like protein (Fragment) | 563 | 4e-056 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G20720.1 CPN20 (CHAPERONIN 20); calmodulin binding | 733 | 5e-078 |
| AT5G20720.2 CPN20 (CHAPERONIN 20); calmodulin binding | 733 | 5e-078 |
| AT2G44650.1 CHL-CPN10 (CHLOROPLAST CHAPERONIN 10); chaperone binding | 112 | 5e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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