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Information for unigene UN80480

FASTA Sequence
Unigene ID: UN80480Length: 660 SSR 
GGAGCTAAATCACACCAAAACCCTAATCTCTCAAATCTTCCCCCAAACACCAAAAGAAAAAAAATGGTTAACCCTAAAGTTTTCTT
CGACATGAGCGTCGGCGACAAACCCGCCGGCCGCATCGTGATGGAGCTTTACGCCGACACAACCCCCGAAACCGCCGAGAATTTCC
GCGCCCTCTGCACCGGCGAGAAGGGAGTCGGCAAATCCGGACGCCGCTCCACTACAAGGGCTCGGCCTTCCACCGCGTGATCCCGA
AGTTCATGTGCCAGGGAGGAGATTTCACCGCCGGGAACGGGACCGGGGGAGAGTCGATCTACGGCATGAAGTTCAAGGACGAGAAC
TTTGTCAAGAAACACACCGGTCCGGGCATCCTGTCCATGGCCAACGCTGGTCCGAACACGAACGGATCTCAGTTTTTCATCTGCAC
TGAGAAGACGTCGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAGGTTGTCGAAGGGATGGATGTCGTTAGGAACATTGAGAAGG
TTGGATCTGACAGTGGAAGGACCTCGAAGAAGGTTTTGATCGCTGACTGTGGTCAGCTTTAGATCTGGTGAGAGAAAAGTGAGAGA
GAGAGAGAGAGGAGGTTGATCCATTGAATAATAATGATAATGATTAATCTTAGTTATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
P24525 RecName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Cyclophilin; AltName: Full=Cyclosporin A-binding protein; AltName: Full=Rotamase6164e-062
AAA62706 cyclophilin [Brassica napus]6164e-062
AAR27291 cyclophilin [Eutrema halophilum]6066e-061
XP_002884009 hypothetical protein ARALYDRAFT_899976 [Arabidopsis lyrata subsp. lyrata]6066e-061
NP_179251 Peptidyl-prolyl cis-trans isomerase CYP19-1 [Arabidopsis thaliana]6041e-060

Swiss-Prot top hits (Blast detail)Scoree value
P24525 Peptidyl-prolyl cis-trans isomerase6162e-063
Q38900 Peptidyl-prolyl cis-trans isomerase CYP19-16045e-062
P34887 Peptidyl-prolyl cis-trans isomerase5893e-060
Q39613 Peptidyl-prolyl cis-trans isomerase5858e-060
Q8W171 Peptidyl-prolyl cis-trans isomerase 15794e-059

TrEMBL top hits (Blast detail)Scoree value
Q6TMX3 Peptidyl-prolyl cis-trans isomerase6064e-061
Q96416 Peptidyl-prolyl cis-trans isomerase5931e-059
B3FNQ1 Peptidyl-prolyl cis-trans isomerase5912e-059
Q96417 Peptidyl-prolyl cis-trans isomerase5885e-059
D6PAY2 Cyclophilin5877e-059

Arabidopsis top hits (Blast detail)Scoree value
AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase6045e-063
AT4G34870.1 ROC5 (ROTAMASE CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase5695e-059
AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase5552e-057
AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase5463e-056
AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase5321e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members