 |
Information for unigene UN80483
FASTA Sequence |
Unigene ID: UN80483 | Length: 755 |
SSR | | GGATACACACACACACATGGCGACTTCCTTTTCCGTCTCCAGACTCCTCTCTTCCTCCGCCATCTCCGTCGCCAAACCGTTACTCT
CCCCAACCTCATCCTTCGCCGCGCCAATCTCCTTCTCCCGCCCTCTCGCTCCCAACCTCTCCCTCAAACTCCGCACCCGCCGCACC
TCTATCTCCTCCGCCAGATCCTCCTCAACAACAACAACCATCTCCGCCTCCATCTCCGTCGGAGACAAACTCCCCGACTCCACCCT
CTCCTACCTCGATCCCGCCACCGGCGACGTCAAAACGGTCACCGTCTCCTCCCTAGCCGCCGGCAAAAAAACCATCCTCTTCGCCG
TCCCGGGCGCCTTCACCCCGACCTGCTCGCAGAAACACGTCCCCGGATTCGTCTCCAAGGCCGGAGAGCCCAGATCCAAAGGCGTC
GACGTCATCGCGTGCGTCTCGGTGAACGACGCGTTCGTGATGGAGGCGTGGAGTAAGGATCTCGGGATTAATGATGAGGTGATGCT
GTTGTCGGACGGTAACGGAGAGTTCACGGGGAAGCTCGGCGTGGAGCTGGATTTGAGGGATAAGCCCGTGGGGCTCGGGGGTTAGG
TCGAGGAGGTACGCGATTCTGGCGGAGGATGGGGTTGTGAAGGTGCTGAATCTCGAGGAAGAGGCGCTTTCACCAACTCTAGTGCT
GAGATATGCTTAAGCTCTTTGATCCCGATTCTGTTTCTCTTTGTGTGTTTTTTTTTGAATTTCCTGA
|
|
|
GenBank top hits (Blast detail) | Score | e value |
NP_190864 peroxiredoxin-2E [Arabidopsis thaliana] | 833 | 4e-087 |
AAK92817 putative peroxiredoxin protein [Arabidopsis thaliana] | 829 | 1e-086 |
XP_002876176 hypothetical protein ARALYDRAFT_485670 [Arabidopsis lyrata subsp. lyrata] | 816 | 4e-085 |
XP_002528579 peroxiredoxin, putative [Ricinus communis] | 552 | 1e-054 |
BAJ89847 predicted protein [Hordeum vulgare subsp. vulgare] | 537 | 8e-053 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q949U7 Peroxiredoxin-2E, chloroplastic | 833 | 2e-088 |
Q69TY4 Peroxiredoxin-2E-1, chloroplastic | 528 | 4e-053 |
Q7F8S5 Peroxiredoxin-2E-2, chloroplastic | 526 | 7e-053 |
Q9XEX2 Peroxiredoxin-2B | 375 | 2e-035 |
Q9SRZ4 Peroxiredoxin-2C | 372 | 5e-035 |
TrEMBL top hits (Blast detail) | Score | e value |
B9SRG0 Peroxiredoxin, putative | 552 | 1e-054 |
A2YF78 Putative uncharacterized protein | 528 | 6e-052 |
B7E2V4 cDNA clone:001-015-H12, full insert sequence | 528 | 6e-052 |
A2X1X4 Putative uncharacterized protein | 526 | 1e-051 |
B7E6P6 cDNA clone:001-035-H06, full insert sequence | 526 | 1e-051 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G52960.1 peroxiredoxin type 2, putative | 833 | 2e-089 |
AT1G65980.1 TPX1 (thioredoxin-dependent peroxidase 1); antioxidant/ oxidoreductase | 375 | 2e-036 |
AT1G65970.1 TPX2 (thioredoxin-dependent peroxidase 2); antioxidant/ oxidoreductase | 372 | 5e-036 |
AT1G60740.1 peroxiredoxin type 2, putative | 372 | 5e-036 |
AT1G65980.2 TPX1 (thioredoxin-dependent peroxidase 1); antioxidant/ oxidoreductase | 310 | 7e-029 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
Unigene Members | |
 |
|
|