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Information for unigene UN80495
| FASTA Sequence |
| Unigene ID: UN80495 | Length: 763 |
SSR | | TTTTTAGCTTTCGTTCCTTCTCTTGCTCAGATCAAAGAACTCTCTCTCTCTCTCCTTCTCTGCCATCTTCTGCGTTCTCTTCTCTG
CCAAAGACAGAGAGAGTAAATATTCATTTAAAGAGAAAAAGAGGAACAAGTGTAACTTAAATCAGTTGTGGTCTTTGTTTGCTTCT
GATTTGTTCTCACCTTCTTCTTCTTTAAAAGAGAAAAACACATCTAGTAGAGGCAAATCATAGAGAAAGCAAAAATGTCGGCGGGA
AAAGAAGCAATAGTAGCTAGCGGAAATGACCACGACGGAGATCAGAATAACGGTAACCACACCGGAAAAACCGAAGAATACGACCC
CTCCACCGGTTCTGCACTAAGCAACTTTCTCTGGCACGGTGGCTCTGTCTGGGACGCTTGGTTCAGCTGCGCATCTAACCAGGTGG
CGCAAGTGCTTCTGACACTACCGTACTCGTTCAGTCAACTAGGGATGTTATCAGGAATAGTACTTCAGATCTTTTACGGCTTACTC
GGAAGCTGGACTGCTTACCTCATCAGTGTTCTCTACGTTGAGTATCGAGCTCGTAAGGAGAAAGAAGGCAAAAACTTCAAAAACCA
CGTTATTCAGTGGTTCGAAGTACTCGATGGGTTACTCGGCACATACTGGAAAGCAGTAGGCCTCGCATTTAACTGCACTTTCCTCT
TGTTTGGATCTGTAATCCAACTCATTGCTTGTGCCAGTACATTTATTACATAAACGATCACTTGGACAGAGACAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACZ67478 auxin resistant 1 protein [Brassica rapa subsp. campestris] | 783 | 2e-081 |
| BAJ33762 unnamed protein product [Thellungiella halophila] | 762 | 7e-079 |
| XP_002879728 hypothetical protein ARALYDRAFT_482819 [Arabidopsis lyrata subsp. lyrata] | 730 | 3e-075 |
| NP_565882 auxin transporter protein 1 [Arabidopsis thaliana] | 726 | 1e-074 |
| Q9FEL7 RecName: Full=Auxin transporter-like protein 2; AltName: Full=AUX1-like protein 2; AltName: Full=MtLAX2 | 639 | 1e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96247 Auxin transporter protein 1 | 726 | 5e-076 |
| Q9FEL7 Auxin transporter-like protein 2 | 639 | 6e-066 |
| Q5N892 Auxin transporter-like protein 1 | 612 | 8e-063 |
| Q8L884 Auxin transporter-like protein 4 | 611 | 1e-062 |
| Q9FEL8 Auxin transporter-like protein 1 | 610 | 1e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D2K9I3 Auxin resistant 1 protein | 783 | 2e-081 |
| Q76DT1 AUX1-like auxin influx carrier protein | 633 | 4e-064 |
| Q257B2 Auxin influx carrier | 629 | 1e-063 |
| Q5NDZ2 Putative auxin influx carrier protein | 628 | 2e-063 |
| C5XQG2 Putative uncharacterized protein Sb03g040320 | 622 | 8e-063 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G38120.1 AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ auxin binding / auxin influx transmembrane transporter/ transporter | 726 | 4e-077 |
| AT5G01240.1 amino acid permease, putative | 608 | 2e-063 |
| AT1G77690.1 LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter | 579 | 5e-060 |
| AT2G21050.1 amino acid permease, putative | 568 | 9e-059 |
| AT5G01240.2 amino acid permease, putative | 396 | 8e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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