RadishBase

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Information for unigene UN80573

FASTA Sequence

Unigene ID: UN80573	Length: 684	SSR
GGAAAGAGAAAGAGAAGAGAAGAGAGACTCATAAGCTCTCCCTCTCCCTCTTTCTCTTTATATATTTTTATAAATACACATTCTCA GATTCTTTGCCTCCTCTCCTCGACGTCGTTGATTTGAGAACAGAAGAAGAAAAGTTTGGATTTTTTTTTATATATAATTTTAAAAG AAGAAGAAGAAGAGAGATGGGTTACATAGGAGCACATGGGGTAGCAGCGCTGCATAGACACAAATACAGTGGTGTGGATCACTCTT ATCTCGCCAAATACGTTCTCCAACCCTTTTGGAATCGTTTTGTCAAAATCTTCCCTCTCTGGATGCCACCCAACATGATAACACTT ACGGGGTTCATGTTTCTCATCATATCTGCGCTGTTAGGCTATGTCTACTCCCCTCAGTTGAATTCTCCTCCTCCTCGATGGGTTCA CTTGGTACATGGACTACTTCTCTTTTTGTATCAGACATTTGATGCGGTTGATGGGAAGCAAGCACGAAGAACTAACTCCAGTAGCC CACTCGGAGAGCTTTTTGATCATGGTTGCGATGCACTTGCTTGTGCGTTTGAAACGATGGCGTATGGGAGTACTGCTATGTGTGGA AGAGACACGTTCTGGTTCTGGATCATTTCAGCTGTTCCATTTATTGGTTCTACATGGGAAACCTATTTTACCAATATACTTA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_172813 ethanolaminephosphotransferase [Arabidopsis thaliana]	836	1e-087
NP_189186 aminoalcoholphosphotransferase [Arabidopsis thaliana]	836	1e-087
AAB53764 aminoalcoholphosphotransferase [Brassica rapa subsp. campestris]	836	1e-087
XP_002875262 hypothetical protein ARALYDRAFT_484318 [Arabidopsis lyrata subsp. lyrata]	836	1e-087
XP_002892758 hypothetical protein ARALYDRAFT_471515 [Arabidopsis lyrata subsp. lyrata]	836	1e-087

Swiss-Prot top hits (Blast detail)	Score	e value
Q550W1 Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 3	376	1e-035
Q54XM0 Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 2	358	2e-033
P22140 Choline/ethanolaminephosphotransferase 1	355	4e-033
P17898 Cholinephosphotransferase 1	335	8e-031
Q9C0D9 Ethanolaminephosphotransferase 1	335	8e-031

TrEMBL top hits (Blast detail)	Score	e value
O04178 Aminoalcoholphosphotransferase	836	1e-087
O82567 Aminoalcoholphosphotransferase	836	1e-087
O82568 AT3g25585/MWL2_21	836	1e-087
Q8W1E9 Aminoalcoholphosphotransferase	818	1e-085
B9RLB3 Diacylglycerol Cholinephosphotransferase	813	4e-085

Arabidopsis top hits (Blast detail)	Score	e value
AT1G13560.1 AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	836	6e-090
AT3G25585.2 AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	836	6e-090
AT3G25585.1 AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	836	6e-090
AT3G25585.4 AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	836	6e-090
AT1G13560.2 AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	572	3e-059

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


8	1			100%

Unigene Members