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Information for unigene UN80607
| FASTA Sequence |
| Unigene ID: UN80607 | Length: 749 |
SSR | | GGGCTTAACAGGAGTGTTCGTTTCTCCAGCAACTTAGGTCTATTGCTTGCTTAGAAGTAACGTTTTTGTATCATTCTTGAATTTTC
GGGAATTCAACCAAAAGAATCATGTCTTGGATCAAGAACCTGGTAAGGATCTCTCAGACAACTTCTTCTGTCGGAAACTTGCTCAG
AAACCACGAATCCTACACTCTCTCATCTCGTTTCTGCACGGCTCTGCAACATCAGCAGCAACAACAGAGCGAGACAGTTCAAGCAA
CGGAGGTCGTTAATGGGTTTGAGAAACAACAACAACAACAACAACAACATCGTTACGAAGGTTTGGCTCCGACCAAAGAAGGAGAG
AAGCCGAGACTGCTTGTTCTAGGGTCGGGTTGGGCAGGTTGTCGTCTTATGAAAGGAATCGATACGAGCATTTACGACGTCGTTTG
CGTCTCTCCTAGGAACCACATGGTTTCCACTCCTCTCTTGGCTTCTACTTGCGTCGGTACGCTTGAGTTTAGGTCCGTTGCAGAAC
CAATTTCTCGTATCCAACCGGCTATTCACGTGAACCTGGTTCTTATTACTTCCTCGCTAATTGCTCAAGACTTGATTCCCAAAACC
ATGAGGTGCATTGTGAGACAGTAACTGATGCGTTAAGCACAGTGAAGCCATGGAAGTTCAAGATAGCTTATGACAAACTTGTACTA
GCTTGTGGTGCAGAGGCATCCACATTTGGGATTAACGGCGTCTTAGAGAACGCCATCTTCT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002889635 hypothetical protein ARALYDRAFT_887930 [Arabidopsis lyrata subsp. lyrata] | 542 | 2e-053 |
| NP_563783 alternative NAD(P)H dehydrogenase 1 [Arabidopsis thaliana] | 523 | 3e-051 |
| AAF82202 Strong similarity to an unknown protein F23F1.9 gi|7432659 from Arabidopsis thaliana BAC F23F1 gb|AC004680. It contains a pyridine nucleotide-disulphide oxidoreductase domain PF|00070. EST gb|AI997290 comes from this gene | 523 | 3e-051 |
| AAM61225 putative NADH dehydrogenase (ubiquinone oxidoreductase) [Arabidopsis thaliana] | 523 | 3e-051 |
| XP_002881079 NDA2 H dehydrogenase 2 [Arabidopsis lyrata subsp. lyrata] | 430 | 2e-040 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| P40215 External NADH-ubiquinone oxidoreductase 1, mitochondrial | 182 | 5e-013 |
| Q55CD9 Probable NADH dehydrogenase | 177 | 2e-012 |
| Q07500 External NADH-ubiquinone oxidoreductase 2, mitochondrial | 172 | 8e-012 |
| O43090 Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial | 159 | 3e-010 |
| P32340 Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 158 | 3e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q8GWA1 Putative uncharacterized protein At1g07180 | 523 | 2e-051 |
| Q8L5V3 Putative NADH dehydrogenase (Ubiquinone oxidoreductase) | 523 | 2e-051 |
| Q9LML0 F10K1.11 protein | 523 | 2e-051 |
| O80874 Putative NADH dehydrogenase (Ubiquinone oxidoreductase) | 421 | 2e-039 |
| B9SI39 Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial, putative | 367 | 3e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G07180.1 NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1); NADH dehydrogenase | 556 | 2e-057 |
| AT2G29990.1 NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2); FAD binding / NADH dehydrogenase/ oxidoreductase | 421 | 1e-041 |
| AT4G21490.1 NDB3; NADH dehydrogenase | 165 | 5e-012 |
| AT4G05020.1 NDB2 (NAD(P)H dehydrogenase B2); FAD binding / disulfide oxidoreductase/ oxidoreductase | 165 | 5e-012 |
| AT4G28220.1 NDB1 (NAD(P)H dehydrogenase B1); NADH dehydrogenase/ disulfide oxidoreductase | 161 | 1e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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