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Information for unigene UN80630
| FASTA Sequence |
| Unigene ID: UN80630 | Length: 728 |
SSR | | GGATAGTGTACGTTCTCAAGCAGCTCGTTCTCTCTCTCTCTCTCTCTCACCTAACTCACTAAAGCAGCTAGCTAAAATGGCGGTTA
CCTTTTCAGATCTACACACAGAGCAGGGTCTCAAATCCGTGGAGGACCACCTCGTCGGAAAAACGTACATCTCCGGAGATCAATTG
TCTGTAGATGATGTGAAGGTATACGCTGCCGTTGTTGAGAAACCAAGCGAGAGTTTCCCTAATGCTAGCAAGTGGTACGACTGTGT
TGCCTCCCACCTTGCTAAAAGTTTCCCTGGTAAAGCCGTAGGAGTTTCAATCGGTGGCTCTGCTTGTGCTCCTGCTCAAGCTGAGG
CACCTGCTGCAGCTGATGATGATGATGACATGGATCTGTTTGGTGACGAGACAGAGGAGGAAAAGAAAGCCGCAGAGGAGAGGGAG
GCTGCTAAGAAGGACACCAAGAAGCCCAAAGAGAGTGGAAAGTCATCTGTGCTCATGGAAGTGAAACCATGGGATGACGAGACAGA
TATGAAGAAACTTGAGGAGTGTGTTCGTGCCGTTGAGATGCCTGGTCTTCTATGGGGAGCTTCAAAACTGGTTCCAGTTGGTTACG
GGATCAAGAAGCTCACGATCATGCTCACAATCGTTGATGACCTCGTGTCCCCAGACAACCTAATTGAAGACTATCTCACCTCTGAA
CCTAACAACGAGTACATCCAGAGTGTTGGCATCGTCGCAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 1001 | 1e-106 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 965 | 2e-102 |
| XP_002871512 hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata] | 928 | 3e-098 |
| XP_002266279 PREDICTED: hypothetical protein [Vitis vinifera] | 835 | 2e-087 |
| XP_002314248 predicted protein [Populus trichocarpa] | 824 | 4e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCX3 Elongation factor 1-beta 2 | 965 | 8e-104 |
| Q84WM9 Elongation factor 1-beta 1 | 904 | 1e-096 |
| P29545 Elongation factor 1-beta | 777 | 5e-082 |
| P29546 Elongation factor 1-beta | 713 | 1e-074 |
| P93447 Elongation factor 1-delta | 656 | 6e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9P7W8 Predicted protein | 824 | 3e-086 |
| B9GEM9 Predicted protein | 801 | 1e-083 |
| B6SIK8 Elongation factor 1-beta | 765 | 2e-079 |
| B6SLK4 Elongation factor 1-beta | 763 | 3e-079 |
| B6T1G9 Elongation factor 1-beta | 756 | 2e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 965 | 8e-105 |
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 904 | 9e-098 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 481 | 1e-048 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 480 | 1e-048 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 480 | 1e-048 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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