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Information for unigene UN80749
| FASTA Sequence |
| Unigene ID: UN80749 | Length: 706 |
SSR | | GGGAAACCCTAATTTCAAATCTGTGCTACACTGCCTTACACACACACATTGCTTCGGATGCAACGATTTGCTAAGAGGTCTGTCCT
ACTAAACCAATGGCCGATGTAAAGGATCGGGGCTTGGAAGCCCTTGACAAGCTAAAATCGACGGAACCACCAGTTTTCCTAGCGCC
AAGCTCGATATCGGAGGTGGCTCGTGTCGCATCTCAGTATCTATTCGCCAGGTTGAAGCCTCACAACCCTAAATCTCCTTTTGAGG
AGCTCTTGGTCGATGGTTTCGATTCCGAGCAGATTTGGCAGCAGATTGATATGCAGTCTCAGCCTTTGTTGTCAAGCTTGCGACAT
GAAGTTAAGCGGTTTGCTAAAAACCCTCGGGAGGTTCGTAAAATCGGAAATTTGGGCCTTGAGGCCTCTCATGAGGGTGATGTTGA
TGAGATGGATATGGATGGGCTTGATTCTGATGATAATAATGATGAGGATGATGAGCTAGAAGCTAACGAAAACGAAGAAGAAGAAG
AAGAAGAGGAAGAGGAAGAAGCCGAGGAAGAAGCTGAGGAGGAAGAGGAAGAGGAAGAGAATGAAGGAATAGAGGACAAGTTCTTC
AAGATCAAAGATTTGGAGGATTTTTTAGAGGAAGGTGAAGCTCAAGAGTATGGCGTCGACTTCAAAACAAGAAAGCTATGTCAAAG
TGAAGAAGAGTGTTACAG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_569037 uncharacterized protein [Arabidopsis thaliana] | 773 | 3e-080 |
| XP_002865060 hypothetical protein ARALYDRAFT_496951 [Arabidopsis lyrata subsp. lyrata] | 728 | 5e-075 |
| XP_002318058 predicted protein [Populus trichocarpa] | 493 | 9e-048 |
| XP_002321609 predicted protein [Populus trichocarpa] | 482 | 2e-046 |
| XP_002511381 U3 small nucleolar ribonucleoprotein protein mpp10, putative [Ricinus communis] | 456 | 2e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q75JC9 Uncharacterized protein DDB_G0271670 | 197 | 9e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FJY5 AT5g66540/K1F13_21 | 773 | 2e-080 |
| B9I3B9 Predicted protein | 493 | 6e-048 |
| B9IET6 Predicted protein | 482 | 1e-046 |
| B9RB06 U3 small nucleolar ribonucleoprotein protein mpp10, putative | 456 | 1e-043 |
| A5C5E1 Putative uncharacterized protein | 455 | 2e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G66540.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 76240 Blast hits to 38667 proteins in 1479 species: Archae - 252; Bacteria - 6537; Metazoa - 31185; Fungi - 9935; Plants - 3937; Viruses - 750; Other Eukaryotes - 23644 (source: NCBI BLink). | 773 | 1e-082 |
| AT5G03710.1 unknown protein | 160 | 2e-011 |
| AT4G02810.1 unknown protein | 153 | 1e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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