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Information for unigene UN80762
| FASTA Sequence |
| Unigene ID: UN80762 | Length: 630 |
SSR | | GGGCTCGCTCTTCTCTTTTGTGCTCCAAAACCAAACATAACACTCACAAAATCTCACATCCCTCTCTCATCTCTCTCTCTCTTCTC
CTATTTCTTTTAAATCCCCAAACTACCCTCGAGATCGATGGAGACAAAGCTGATCATAGGTCTCAGTTCTTTTTTCAAATCCCAAG
CCTCTGTCTCCTCTTCATCTTAAGAGAAAAAGATAAAACAACGGACCGTTAGTTTCTGCCAGCCAAAACTATGAGACCAATCTTAG
ACCTTGAGGTTGAAGCTCCATCGGAACATGATCATCCAAACGATACCAGTAGCCAAGCTGTCTCGAACTTGTCTCCGGTAGGAGAA
TATTGCAGACCCATGTCTCTGAATCTTAGCCTCCGTTTCAACAACAACAATTTGGATCTTGAATCATCTTCTTTGACGCTGCCAAT
TTCGAGCACGAGCGAAAGTAACAACCCAGAGCAACAACAACAACAACAACCGTCTGCATTGAAGAGAGTCTTTTCTTGCAACTACT
GTCAAAGAAAGTTTTACAGCTCTCAGGCTCTTGGCGGTCACCAGAACGCTCACAAACGTGAAAGAACGCTCGCAAAACGTGCTGTG
CGTATGGGTCTGGCTGGAGTTTTCCCTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176788 zinc finger protein 4 [Arabidopsis thaliana] | 508 | 1e-049 |
| XP_002888482 hypothetical protein ARALYDRAFT_475716 [Arabidopsis lyrata subsp. lyrata] | 504 | 4e-049 |
| AAA87300 zinc finger protein [Arabidopsis thaliana] | 467 | 7e-045 |
| XP_002301667 predicted protein [Populus trichocarpa] | 308 | 2e-026 |
| XP_002533536 zinc finger protein, putative [Ricinus communis] | 262 | 4e-021 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39263 Zinc finger protein 4 | 508 | 6e-051 |
| Q42485 Zinc finger protein 1 | 213 | 1e-016 |
| Q39261 Zinc finger protein 2 | 205 | 8e-016 |
| Q39266 Zinc finger protein 7 | 201 | 2e-015 |
| Q39262 Zinc finger protein 3 | 187 | 1e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WLF4 Zinc finger protein ZFP4 | 508 | 9e-050 |
| B9GUN9 Predicted protein | 308 | 1e-026 |
| B9T5L7 Zinc finger protein, putative | 262 | 3e-021 |
| B9H3D1 Predicted protein | 259 | 6e-021 |
| B9SNH3 Zinc finger protein, putative | 255 | 2e-020 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G66140.1 ZFP4 (ZINC FINGER PROTEIN 4); nucleic acid binding / transcription factor/ zinc ion binding | 508 | 6e-052 |
| AT1G80730.1 ZFP1 (ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding | 213 | 1e-017 |
| AT5G57520.1 ZFP2 (ZINC FINGER PROTEIN 2); nucleic acid binding / transcription factor/ zinc ion binding | 205 | 8e-017 |
| AT1G24625.1 ZFP7 (ZINC FINGER PROTEIN 7); nucleic acid binding / transcription factor/ zinc ion binding | 201 | 2e-016 |
| AT5G10970.1 zinc finger (C2H2 type) family protein | 191 | 3e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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