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Information for unigene UN81061
| FASTA Sequence |
| Unigene ID: UN81061 | Length: 742 |
SSR | | GGAGAAGAAGACTCGAAGCTTCTTTCAGAAAAGGAGAAATTAATCGAGCATGGAAGAAGAAGCAATCGCAACGAGGATGACGTACT
GGTGCCACATGTGCTCTCGAACTGTGGATCCACTTATGGAAGCTGAGATCAAATGCCCCTTTTGTGCAAGTGGCTTTGTTGAAGAG
ATGGCCGACGAAGAGGAACATGATGATAACAGAGCAAACAGCACCTCTCTCTGGGCTCCCATCTTGATGCAACTCATGAATAATCC
TTCTAACCAGACTACTGCTGAAGATAATCAAAACCACGAGGCAGAGGCAGAGACCGAGACCGAGACCGAGAACGAAGCTGCTGGAA
ACGATGTGGATTCTCAGCTCCAAGAGATCCTCAGGAGAAGAAGAGGAAGAAGTTCTGTTTCCGTCATACGACTATCTCTTCGTGGA
GTAGGAGGAGCAGGGTCGACACTTGAACCTGATGACAACAACAACAACAACAACAACAACGGAGATGGTGGTGGTGGTGGTGATAG
AGAGAGAGGACGCTTGATCATGGTGGATGGTGGTTCTCTGAGTGAGTATTTCATCGGTCCTGGATTCGAAGCCCTTCTTCAGCGTT
TAGCAGACAACGGTCCCAACAGATACGGTACACCTCCAGCTCTCAAAGAAGCTGTTGAGTCTTTGTCTACTGTCAAATCCAAGAGG
AGATGCTCTGCAGTGTTCGTTTGTTGGAGATTTTGTGATGGGATGGAGCGAGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564693 RING/U-box domain-containing protein [Arabidopsis thaliana] | 529 | 7e-052 |
| XP_002894508 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 521 | 6e-051 |
| ADK63410 C3HC4 type zinc finger protein [Brassica rapa] | 290 | 3e-024 |
| XP_002319703 predicted protein [Populus trichocarpa] | 200 | 9e-014 |
| CBI16568 unnamed protein product [Vitis vinifera] | 188 | 2e-012 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZVU8 At1g55530/T5A14_7 | 529 | 5e-052 |
| B9SBM6 Zinc finger protein, putative | 296 | 5e-025 |
| B9SHI7 Zinc finger protein, putative | 239 | 2e-018 |
| B9I601 Predicted protein | 200 | 6e-014 |
| C6TFL2 Putative uncharacterized protein | 169 | 3e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein | 529 | 3e-054 |
| AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein | 254 | 2e-022 |
| AT3G13430.2 zinc finger (C3HC4-type RING finger) family protein | 254 | 2e-022 |
| AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein | 160 | 2e-011 |
| AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein | 156 | 5e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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