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Information for unigene UN81148
| FASTA Sequence |
| Unigene ID: UN81148 | Length: 679 |
SSR | | GGACACTCATCATCGCCGTGCTTTACAGCTTCTTCTTCTTCTTTAGTCTTTCCCTTTTCTCTTTTTTTGCTTATATCTTCAGCAAA
TCTGATTTCAAGAGAATAAAAAAAAATCACCGAAGAAAGAAAAAAGAATGAGTGAGGGTAGGATAAAGAAGAGTGTGAACGGAGGA
GGAGCACCGGCGCAAACGAATCCCGATGATCGGAGATCTAGTGTTGAAGTTTCTCAATCGGCGGCGGGGAAGCGAGCTGTAGTAAA
GAGTGCTGATATGAAAGAGGATATGCAGAAGGAGGCTATCGATATCGCTATCGCCGCATTTGAGAATAACAGTGTGGAGCCAGCTA
TTAGAGCAGAAATGGAAGGTGGAAATTTGCGAGAGGATGCTCCTGAGACATTTGAGAACAGGGATAGTATAAGAGCTTCGATTCCA
AGCTTTGATGAGGTGTATTTAAAAGTACCTAAAGTACTAAACAAAGAGTGACTTTTTGTCAGCTTCTTCGGGTTGTGTGGTGGCAG
AAGAGATTCAATCTCAGCTCCGGTTCCACCATCTCTTTATTTTTATTTTTTGATTTGGTTAGGAGAGACCAAAGCTGCCTCTAAAC
TATCAAGTCTCACGAAGGCTATTACTCTACAACATGGTTTGAGCTCAATCCGTCCATTTTCATCGTTAATCGTTTAT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002869233 Glu-tRNA amidotransferase subunit C [Arabidopsis lyrata subsp. lyrata] | 246 | 4e-019 |
| NP_567909 uncharacterized protein [Arabidopsis thaliana] | 240 | 2e-018 |
| AAG29097 Glu-tRNA(Gln) amidotransferase subunit C [Arabidopsis thaliana] | 240 | 2e-018 |
| AAM65443 Glu-tRNA(Gln) amidotransferase subunit C [Arabidopsis thaliana] | 240 | 2e-018 |
| XP_002870199 At4g15930 [Arabidopsis lyrata subsp. lyrata] | 224 | 1e-016 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LAD3 Glu-tRNA(Gln) amidotransferase subunit C | 240 | 1e-018 |
| Q9FV80 Glu-tRNA(Gln) amidotransferase subunit C | 240 | 1e-018 |
| Q84VW0 At4g15930 | 218 | 4e-016 |
| B9RRX2 Glutamyl-tRNA(Gln) amidotransferase subunit C, putative | 188 | 1e-012 |
| B9INH0 Predicted protein | 186 | 2e-012 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G32915.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translational fidelity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glu-tRNAGln amidotransferase, C subunit (InterPro:IPR003837); Has 1227 Blast hits to 1227 proteins in 425 species: Archae - 17; Bacteria - 884; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). | 241 | 6e-021 |
| AT4G15930.1 microtubule motor | 218 | 3e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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