Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN81161

FASTA Sequence
Unigene ID: UN81161Length: 532 SSR 
TAAAAAGGGGAAGAAGAAGAAGAAGTAGGAACACAGAGACACCACCACTTGTGCGCAAAAAACTTTCGCACTGTCCAACGATCTCA
AACTCTCTCTCTCTTTCTCTCTCACCCTAAACCCTTTTCTCGCACGTTGCTTGCTTGTGAACTCGGATTCGCATTTCACAAAAGAG
TATCTCTCTCTCGTTCAATCTCTCACCAGTCAAAAAAAGGCTTTAATCATCAGGAAGAGAGAGACAACGATAGAGGGAGAGATGCT
CACGTGCATAGCTTGCTCGAAGCAGTTAAATACCAACAACGGCGGATCTAAGGAAGAAGACGACAGAGTTCTTGGAACGCCCAGGT
CTAAGCAGACCATCAAGTCCCTGACGTCACAATTAAAAGACTTGGCAGTAAAAGCATCAGGTGCTTACAAGAGCTGCAAACCGTGC
TCAGGCTCTTCTTCGAACCGGAACCACCACCGTGACTCAGATGCTGCTGCATCACCTTCTGGGAGGTTCCATTACGCGTACAAGAG
ACCTGGAAGAAGCGGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891794 predicted protein [Arabidopsis lyrata subsp. lyrata]3375e-030
AAD25792 F15I1.28 [Arabidopsis thaliana]3332e-029
AAV91342 At1g54180 [Arabidopsis thaliana]3332e-029
AAW39016 At1g54180 [Arabidopsis thaliana]3332e-029
NP_175820 BREVIS RADIX-like 3 [Arabidopsis thaliana]3332e-029

Swiss-Prot top hits (Blast detail)Scoree value
Q5HZ09 Protein Brevis radix-like 33339e-031
Q8GYL9 Protein Brevis radix-like 23257e-030
Q6YUB8 Protein Brevis radix-like 12002e-015
Q17TI5 Protein BREVIS RADIX1626e-011
O82281 Protein Brevis radix-like 11447e-009

TrEMBL top hits (Blast detail)Scoree value
B9GKW2 Predicted protein (Fragment)2693e-022
B9S5S9 Ran GTPase binding protein, putative2684e-022
C6TI58 Putative uncharacterized protein (Fragment)2585e-021
B9GWC1 Predicted protein (Fragment)2452e-019
A5AXI0 Putative uncharacterized protein2371e-018

Arabidopsis top hits (Blast detail)Scoree value
AT1G54180.1 BRX-LIKE3 (BREVIS RADIX-LIKE 3)3339e-032
AT1G54180.2 BRX-LIKE3 (BREVIS RADIX-LIKE 3)3339e-032
AT3G14000.1 ATBRXL23257e-031
AT3G14000.2 ATBRXL23257e-031
AT1G31880.1 BRX (BREVIS RADIX); identical protein binding / water channel1626e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members