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Information for unigene UN81244
| FASTA Sequence |
| Unigene ID: UN81244 | Length: 709 |
SSR | | GGATACATATAGTTCCTATCCTAATATCCATTATCGTCGTCTCCTTGGTTCCGACCTTTTTGTCTTCTATCTTTAGATCTGTTAAT
CCATGGCTTCACTTAGTTATTACTAGTTTGTGTTTGTCTTCTGTGTGATAGTATTTGTAATAACTTGGTATTTGATTTAAGAAATG
GCAACTTTGAACCCTTTTGATCTGTTGGATGACGACGCTGAGGATTTGGCCGTGGTCGTGGTGGTAACAACCGTGAAGGTTCCGGA
GGTAACAATCGGTATTCAGGGGGATACAGTAAGCCCTCTGAGGAAAGAGACGTTACAAAGCCTTCTTATGAGAGACGTGGTGGTGG
TGGTGGAGGAGGATATGGAGGTCCTCCTCGTGGTGGTAGGCGTGGTGAAGCTGGTGAAGGTGAACGTCCTCGAAGGGCATTTGAGC
GTCGTAGTGGAACTGGCAGAGGGGGTGACTTCAAACGTCGAAACACTCGTGCGGGTCTCCTTCAGTTTTCCTATTCTGGTTGAAAT
CAAGACTGAAGGAATTCCCATGAGAGGGTTTACTGTTTACCAGTCTGTTGTTGTCATTTGTAAATTTTTAGTTGTCGTTTTTAGAT
TTTGTGCAAACTTTTGCCTCGCTGTTTTCTTTTTCCACTTTTGAAACATTACACTCTTTTTAGTCGTCAGTTCACCACTTGGTCGT
TGTATGAAAACATGTTTCGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193416 hyaluronan / mRNA binding domain-containing protein [Arabidopsis thaliana] | 310 | 1e-026 |
| NP_001078400 hyaluronan / mRNA binding domain-containing protein [Arabidopsis thaliana] | 310 | 1e-026 |
| AAM61393 nuclear antigen homolog [Arabidopsis thaliana] | 301 | 2e-025 |
| XP_002870130 hypothetical protein ARALYDRAFT_493188 [Arabidopsis lyrata subsp. lyrata] | 301 | 2e-025 |
| XP_002531778 Plasminogen activator inhibitor 1 RNA-binding protein, putative [Ricinus communis] | 235 | 7e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O70133 ATP-dependent RNA helicase A | 132 | 3e-007 |
| Q9U299 5'-3' exoribonuclease 2 homolog | 130 | 5e-007 |
| A3PY75 Translation initiation factor IF-2 | 122 | 4e-006 |
| A1UER8 Translation initiation factor IF-2 | 122 | 4e-006 |
| Q1BA94 Translation initiation factor IF-2 | 122 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MQJ5 Uncharacterized protein At4g16830.3 | 310 | 1e-026 |
| O23523 AT4g16830/dl4440w | 310 | 1e-026 |
| Q8LFI3 Nuclear antigen homolog | 301 | 1e-025 |
| B9T0K9 Plasminogen activator inhibitor 1 RNA-binding protein, putative | 235 | 5e-018 |
| B9RCY9 RNA binding protein, putative | 219 | 4e-016 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16830.1 nuclear RNA-binding protein (RGGA) | 310 | 7e-029 |
| AT4G16830.3 nuclear RNA-binding protein (RGGA) | 310 | 7e-029 |
| AT4G16830.2 nuclear RNA-binding protein (RGGA) | 123 | 3e-007 |
| AT1G31290.1 PAZ domain-containing protein / piwi domain-containing protein | 121 | 5e-007 |
| AT3G22800.1 leucine-rich repeat family protein / extensin family protein | 116 | 2e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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