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Information for unigene UN81319
| FASTA Sequence |
| Unigene ID: UN81319 | Length: 713 |
SSR | | TACTCCAAAGCTAGGTCAGGCTCCTTCAGGTATTAGCTCTCGGTCGGTGTCACCTTTCTCTAGGAGGTCTAGTCCTCCACGCTCTG
CCACTCCTATGCCTTCAACTTCTGGAATCTATTTCCCGGTGGGTGTGGCGGATAATATGAGGAAGACAAATGAGATGTTGAATCAG
GAGATTATTAAGTTAAGAACACAGGTTGATAGTCTGACTCAAAAGTGTGAAGTCCAAGAAGTAGAGCTCAAGAAGTCGGTTAAGAA
GACTCAGGAAGCCTTAGCATTGGCAGAGGAGGAATCTGCCAAGTCAAGAGCCGCAAAAGAAGCAATCAAGTCGCTCATAGCGCAGC
TCAAGGATGTAGCTGAGAAGTTGCCTCCTGGTGAGAGCATAAAACTCGGATTAGACCAGAACGGTTTCCATTTCCCTGAAGAAAAC
GGTTTCCATTCATCAAGATCAGAGTCAATGACTTCCTCTGTATCTTCAGTTGCTCCTTTTGACTTCTCCTTTGCGAATGCATCTTG
GTCCAATCTCCAATCACCAAAGCACACGCCTAGAGCAGGCGAAAGAAACAACAACAACAACAACGGTTATCCCTCAGACCCACGTC
TTAGCAGCAGCGGGTCAGTAATCAGTGAGAGACACGAGCCTTTCCAGTTCCATAACAATGGTTCTAGCCAAACAGAGCTGACAACA
ATACTAATGAGTAGAAGCAGAGTGG
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| GenBank top hits (Blast detail) | Score | e value |
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| AAL58903 At1g76950/F22K20_5 [Arabidopsis thaliana] | 995 | 6e-106 |
| AAC00618 Unknown protein, contains regulator of chromosome condensation motifs [Arabidopsis thaliana] | 995 | 6e-106 |
| NP_565144 regulator of chromosome condensation and FYVE zinc finger domain-containing protein [Arabidopsis thaliana] | 995 | 6e-106 |
| XP_002887663 zinc finger protein [Arabidopsis lyrata subsp. lyrata] | 982 | 2e-104 |
| XP_002526126 Ran GTPase binding protein, putative [Ricinus communis] | 470 | 4e-045 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| O49281 F22K20.5 protein | 995 | 4e-106 |
| Q8W111 At1g76950/F22K20_5 | 995 | 4e-106 |
| Q947D2 Zinc finger protein | 995 | 4e-106 |
| B9SJF7 Ran GTPase binding protein, putative | 470 | 3e-045 |
| B9GTL0 Predicted protein | 460 | 4e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G76950.1 PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding | 995 | 2e-108 |
| AT5G42140.1 zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein | 413 | 8e-041 |
| AT5G12350.1 Ran GTPase binding / chromatin binding / zinc ion binding | 339 | 3e-032 |
| AT5G19420.1 Ran GTPase binding / chromatin binding / zinc ion binding | 339 | 3e-032 |
| AT3G23270.1 regulator of chromosome condensation (RCC1) family protein | 216 | 5e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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