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Information for unigene UN81343

FASTA Sequence
Unigene ID: UN81343Length: 670 SSR 
GGGAAGTCAAAGATCAGATTCTTCTTCTTCTTCTTCTTCCTACGATGTATCAAATATTCTTCATCTTCTTCGTTACAATCTTCCAC
AGTTACTACTATGCATCTGCTCAGCCACCTGCTCCTCCGTTCAGAAACGGCGACCTCGTCACAAACTTCGAGCCGAGTTTAGCCGT
CGTCACCGGCGTTCTCGCCATTATGTTCACACTCACTTTCGTCCTCCTCGTCTACGCTAAGTGCTGCCACATCGATCTCCGGTCAG
GTACCGGCGACGGAAGACGGCAAGATCGCCGGATCCTACAAGGAATATTCTTCAACCGGTCTACTAACTCCTCGGACCGATTCTCC
GATTTGGACAAAACAGAGATCGAGTCACTTCCTCTGTTTAGATTCTCTGCTTTGAAAGGATCAAAACAAGGGCTTGAGTGTTCCGT
CTGCCTATCTAAATTCGAAAACGTCGAGATTCTTAGATTGTTGCCTAAATGTCGTCACGCTTTCCACGTGGGGTGCATCGATACGT
GGCTTGAGCAGCACGCGACGTGTCCTCTCTGCAGAGCAAGAGTCTCAGTGGAAGATGAGTCCTCTGTCTCTGTTTATGGTAACAGC
TTCCGGTTCTTGAATCAGTCTGAGGCACGAGAAGACTCGAGCTTGGAGCTTTACATCGAGAGGGAAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867435 ring-H2 finger protein ATL4J precursor [Arabidopsis lyrata subsp. lyrata]8844e-093
NP_194618 E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana]8791e-092
AAU84668 At4g28890 [Arabidopsis thaliana]7204e-074
XP_002886004 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6505e-066
NP_179593 putative RING-H2 finger protein ATL12 [Arabidopsis thaliana]6272e-063

Swiss-Prot top hits (Blast detail)Scoree value
Q5XF85 RING-H2 finger protein ATL4J8797e-094
Q9SL78 Putative RING-H2 finger protein ATL2D6271e-064
Q5EAE9 RING-H2 finger protein ATL5C3752e-035
Q8W571 RING-H2 finger protein ATL4O2953e-026
Q9LF64 Probable RING-H2 finger protein ATL5G2668e-023

TrEMBL top hits (Blast detail)Scoree value
Q4TU11 RING finger family protein8799e-093
C6TGT4 Putative uncharacterized protein4919e-048
A5ANK5 Putative uncharacterized protein4424e-042
B9IKJ7 Predicted protein4282e-040
B9ILR6 Predicted protein4183e-039

Arabidopsis top hits (Blast detail)Scoree value
AT4G28890.1 protein binding / ubiquitin-protein ligase/ zinc ion binding8796e-095
AT2G20030.1 zinc finger (C3HC4-type RING finger) family protein6271e-065
AT5G05810.1 ATL43; protein binding / zinc ion binding3554e-034
AT4G40070.1 protein binding / zinc ion binding2953e-027
AT5G17600.1 zinc finger (C3HC4-type RING finger) family protein2668e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members