Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN81377

FASTA Sequence
Unigene ID: UN81377Length: 657 SSR 
GGGATGTCTGATTGGCAGTAGCAGTTTGCATTTTCACACATAACTCTCCATATCTATTCCATCATCACACGTCTTCTGTGATTCAG
AGAAACAAACTTTCAAGCTTTGTCTGATTCTTCTTCTTCTTCTTCTTCTTTCTCCATACCGCACCAGCTTCTCCATATATCTCTCA
AATAAAAAAGAAACCTATAAATTCCAAACAAAAGAAGAAGATAATGGATAACTCCGGCATGCTAATGAACATGATGATGCAGCAAA
TGGAGAAGCTTCCTGATCAGTTCTCTAACACAAACCCTAACCCTAATTCCCATGACATCATGATGCTCTCCGAATCCAGCACTCAC
CCGTTCTTCTTCAACCCCAACCATACTCATCTCCCACTACTTGACCCAAACCTCACTCACCACCACCACCAATCCGGTTTAAGTTT
CCGGTATGCCCCTTCCACTTCATCATCTCTCCCGGACAAAAGAGGAGGAGGAGGCGATAACGCTAACATGGCGGCGATGCGAGAGA
TGATCTTTCGAATAGCCGTGATGCAACCGATACATATTGATCCGGAATCTGTGAAGCCACCGAAGAGGAAGAACGTGAGGATCTCT
AAAGATCCACAGAGCGTGGCGGCTCGACATCGGAGGGAGAGAATAAGCGAACGCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190602 transcription factor HEC2 [Arabidopsis thaliana]6381e-064
BAD43783 putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]6334e-064
XP_002877739 hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp. lyrata]6291e-063
NP_201507 transcription factor HEC1 [Arabidopsis thaliana]3191e-027
XP_002866720 hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp. lyrata]3191e-027

Swiss-Prot top hits (Blast detail)Scoree value
Q9SND4 Transcription factor HEC26386e-066
Q9FHA7 Transcription factor HEC13195e-029
Q9LXD8 Transcription factor HEC32059e-016
O81313 Transcription factor IND1772e-012
Q8S3D2 Transcription factor bHLH871682e-011

TrEMBL top hits (Blast detail)Scoree value
C6TJ68 Putative uncharacterized protein2902e-024
Q00M80 BHelix-loop-helix transcription factor2686e-022
B9H6G7 Predicted protein2642e-021
C6TIG7 Putative uncharacterized protein (Fragment)2642e-021
B9MVS4 Predicted protein2571e-020

Arabidopsis top hits (Blast detail)Scoree value
AT3G50330.1 HEC2 (HECATE 2); DNA binding / transcription factor6385e-067
AT5G67060.1 HEC1 (HECATE 1); transcription factor3195e-030
AT5G09750.1 HEC3 (HECATE 3); DNA binding / transcription factor2059e-017
AT4G00120.1 IND (INDEHISCENT); DNA binding / transcription factor1772e-013
AT3G21330.1 basic helix-loop-helix (bHLH) family protein1682e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members