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Information for unigene UN81480

FASTA Sequence
Unigene ID: UN81480Length: 342 SSR 
GGATCCCACAGAGAAAACTTTCTGGATGGAAAACAGTAGAAGAAGCTTCAATTCAATCATCGTCAACGCTGCTTGAAAGATGCGCA
GCCTCACTCTAACACTTAGATCCTCTTCCCTCCCATTATTCACCTTCACCTCCTCCTCCTCCTCTTCTTCCTCCTCCTTCAGACGA
TTCCATTTCCTTAAGCCATGCTCTTCCCTCAAACAAACGAAGAAGAACCAACAGTCTCTCCGCCGCTCCCCGCCTCCTTCCACAGC
CCCTCCTCCCCAGAGTCTTCGCTGGTTCTTCAATCCCAAATCCAGTAACGAAGATGACGACGCTAAATCAACCAAAGCTGAGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893250 hypothetical protein ARALYDRAFT_472530 [Arabidopsis lyrata subsp. lyrata]2568e-021
NP_564182 SNARE associated Golgi protein family [Arabidopsis thaliana]2423e-019
CAN68419 hypothetical protein VITISV_041846 [Vitis vinifera]1618e-010
XP_002327389 predicted protein [Populus trichocarpa]1456e-008
CBI31257 unnamed protein product [Vitis vinifera]1448e-008

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O23137 At1g22850/F29G20_192422e-019
B9SHP5 Putative uncharacterized protein1813e-012
A5BXR4 Putative uncharacterized protein1616e-010
A9PH39 Predicted protein1454e-008
A9PFS1 Putative uncharacterized protein1348e-007

Arabidopsis top hits (Blast detail)Scoree value
AT1G22850.1 INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03260.1); Has 3098 Blast hits to 3098 proteins in 664 species: Archae - 6; Bacteria - 1614; Metazoa - 182; Fungi - 59; Plants - 145; Viruses - 0; Other Eukaryotes - 1092 (source: NCBI BLink).2429e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members