RadishBase

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Information for unigene UN81592

FASTA Sequence

Unigene ID: UN81592	Length: 615	SSR
GCACGAGGGTCCGCTGATGTTGAGTACCGGTGCTTCGTCGGAGGTCTAGCATGGGCCACCGATGAGAGATCTCTCGAGACCGCCTT CTCTCAGTTCGTGGAGCTTGTTGATTCCAAGATCATTAACGATCGTGAGACGGGAAGATCAAGGGGATTTGGGTTCGTCACTTTCA AGGATGAGCAGGCCATGAAGGACGCCATCGAAGGGATGAACGGACAGGAGCTTGACGGTCGCAGCATCACTGTGAACGAGGCTCAG TCCCGAGGAAGCGGCGGCGGAGGTGGTGGACGTGGTGGTGGCGGTGGATACCGCGGTGGTGGTGGTGGTGGATACGGAGGTGGCGG TGGTTACGGAGGTGGAAGACGCGAGGGTGGATACAGTGGTGGTGGAGGTGGCTACTCCTCAAGAGGAGGTGGTGGCGGAGGATACG GTGGAGGTGGAAGACGTGAGGGTGGGGGTTACGGAGGTGGTGAAGGTGGAGGTTACGGAGGAGGCGGCGGTGGTGGTGGTTGGTAA TTAGATTAGGTGTGTGAGACCGTTACGTTTCTGGTTCGGGTTTTATTGTTCTCTTATGTGTTCTGCTGTCTGGTTCTGCTGTCTGG TTCTGGTTTGTGC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
P49311 RecName: Full=Glycine-rich RNA-binding protein GRP2A	838	6e-088
ACJ04160 putative glycine-rich RNA-binding protein [Chorispora bungeana]	806	3e-084
NP_179760 glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]	789	3e-082
P49310 RecName: Full=Glycine-rich RNA-binding protein GRP1A	779	4e-081
AAM62447 glycine-rich RNA binding protein 7 [Arabidopsis thaliana]	764	2e-079

Swiss-Prot top hits (Blast detail)	Score	e value
P49311 Glycine-rich RNA-binding protein GRP2A	838	3e-089
Q03250 Glycine-rich RNA-binding protein 7	789	2e-083
P49310 Glycine-rich RNA-binding protein GRP1A	779	2e-082
Q03251 Glycine-rich RNA-binding protein 8	693	2e-072
Q05966 Glycine-rich RNA-binding protein 10	664	5e-069

TrEMBL top hits (Blast detail)	Score	e value
B6VA25 Putative glycine-rich RNA-binding protein	806	2e-084
Q6YNS1 Putative glycine-rich RNA-binding protein	671	1e-068
Q41453 Putative glycine rich RNA binding protein	629	8e-064
A9NML8 Putative uncharacterized protein	622	5e-063
Q41518 Single-stranded nucleic acid binding protein	621	7e-063

Arabidopsis top hits (Blast detail)	Score	e value
AT2G21660.1 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding	790	1e-084
AT4G39260.1 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding	693	2e-073
AT2G21660.2 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding	622	3e-065
AT4G39260.2 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding	514	1e-052
AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding	455	8e-046

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


15	1			100%

Unigene Members