Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN81806

FASTA Sequence
Unigene ID: UN81806Length: 826 SSR 
CTCGGAATTCGCGAAAAGAAAGAAAAAAAAACTGGGTCTCACGAGAAAAATTATTACCCCTAAATTTAACAAAGAGAAGAAAGTTT
CTTCCTTTACTTTCTCTAAACACCAAACCTTCTTCGATGGATTCTAGAGAACTCCACCAACACCAACAACAACAACAACAGCACCA
ACAACAGCAACAGCAACAGCTTCAGCTTCAACCACCGCCTGGGTTCCTAATGGGCTCCTACAATCGAAACCCTAACGCCGCCGCCG
CAGCCGCCGCAGCAGCTTTAATGGGTCCCACATCCACATCTCAGGCGATGCACCACCGCTTACCTTTCGGCGCTCTCTCACCGCAT
CAACCCCAACAACATCACCAGCAGCAGCATCCTCACCATCATCAACCTCAGCCGCAGCATCAGATTGATCAGAAGACGCTTGAATC
TCTCGGATTCGAGGGATCGCCTTCCTCCGTCGCCGCCGCCGCCGCGACGACCCAGCAGCAGCAGCCGATGCGATTCGGGATCGAGC
AGCAGCAGGCGAAGAAGAAGAGAGGAAGGCCGAGGAAGTATGCTCCTGATGGTGGTGGTGGTAACAACATTGGTCTCGCTCTGGCT
CCTACATCCCCTGCTTCTAATTCGTACGGCGGTGGCACGGAGGGTGGTGGTGGTGGTGGAGATAGCGGCGGAGGAGGAGGAGGAGG
GAATGCGAATTCTTCCGATCCGCCTGCTAAACGGAACAGAGGTCGTCCTCCTGGCTCCGGTAAGAAGCAGCTCGATGCTTTAGGAG
GAACAGGTGGAGTTGGGTTTACACCTCATGTCATTGAGGTCAAAACTGGAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA11837 AT-hook protein 2 [Arabidopsis thaliana]8237e-086
NP_567546 AT hook motif DNA-binding family protein [Arabidopsis thaliana]8237e-086
CAA17138 putative protein [Arabidopsis thaliana]7653e-079
XP_002868028 hypothetical protein ARALYDRAFT_914905 [Arabidopsis lyrata subsp. lyrata]7466e-077
XP_002865172 hypothetical protein ARALYDRAFT_494313 [Arabidopsis lyrata subsp. lyrata]4241e-039

Swiss-Prot top hits (Blast detail)Scoree value
P26687 Twist-related protein 11423e-008
Q9NP73 UDP-N-acetylglucosamine transferase subunit ALG13 homolog1423e-008
Q8MIH8 Twist-related protein 11342e-007
Q8MIE7 Twist-related protein 11342e-007
A3CG83 Putative glycine-rich cell wall structural protein 11281e-006

TrEMBL top hits (Blast detail)Scoree value
O49350 AT-hook protein 28234e-086
Q940I0 AT-hook motif nuclear localized protein 138234e-086
O49694 Putative uncharacterized protein AT4g179507652e-079
Q9FIR1 AT-hook motif nuclear localized protein 83631e-032
B9S1G5 DNA binding protein, putative3002e-025

Arabidopsis top hits (Blast detail)Scoree value
AT4G17950.1 DNA-binding family protein8233e-088
AT5G46640.1 DNA-binding family protein3636e-035
AT3G22800.1 leucine-rich repeat family protein / extensin family protein1243e-007
AT2G36120.1 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1)1191e-006
AT3G19020.1 leucine-rich repeat family protein / extensin family protein1182e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  100%

Unigene Members