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Information for unigene UN82029
| FASTA Sequence |
| Unigene ID: UN82029 | Length: 876 |
SSR | | TCTAGGGCTCTCAACCTTTCCCTCTCTGATCCGTTTCCTTCTCCAAGCTCAGGTGAAACAAGATGCAAGCTGTGATTCGTTCGTTC
GTGTCCGGTGGAAATGTTGTCAGATCGTCTCTGCTGCAGCATCTCCGTGTGATCAACCCTGCGATTCAGCCTTCTGTGTTGTTGTC
TTCACGCTCTGAGTCCACTCAGCCTGCTCGTATGGAGGAGCATGGATTCGAGAGCACGACCATTTCCGATGTTATGAACGCTAAAG
GCAAAAGCGCTGATGGATCTTGGCTTTGGTGTACCACTGATGACACTGTTTACGACGCCGTTAAATCCATGACGCAACACAATGTT
GGTGCCTTGGTGGTTGTGAAACCTGGTGAGCAACAATCTCTTGCTGGTATCATTACAGAGAGAGATTATCTGCGAAAGATCATTGT
GCAAGGTAGATCATCCAAATCAACAAAAGTAGGAGACATTATGACTGAAGAGAATAAGCTTATCACCGTGACACCAGAGACCAAGG
TGTTGGTCGCTATGCAGCTGATGACAGTTAATCGGTTTGTTGTGTGTGTGTGTACAGATAACAGGATCAGGCACATTCCGGTGATC
AAAGACAAGGGTATGATAGGAATGGTGTCCATAGGAGATGTGGTCCGTGCAGTGGTGACTGAGCATCGTGAGGAGCTTAACCGCCT
AAATGCCTTTATTCAGGGAGGTTACTAGACGCTAGCTACCCTTTGCTGTGTGGTGGTTGTTGATGAATCTCGAAAGCTTTTAAGAT
GTATGTATATATATGGAGATCTTGGGTGTTTGTCTCATGTTTGTTTTGTGTTTTTAAATCTGCTTTTTCAATTGGTTAACTTGTCA
AGACTAAGCTCTTGTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196647 CBS domain-containing protein [Arabidopsis thaliana] | 732 | 3e-075 |
| XP_002873481 CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 726 | 1e-074 |
| ACJ84966 unknown [Medicago truncatula] | 640 | 1e-064 |
| AAT08729 CBS1 [Hyacinthus orientalis] | 632 | 1e-063 |
| CBI15781 unnamed protein product [Vitis vinifera] | 624 | 9e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LEV3 Uncharacterized protein At5g10860, mitochondrial | 737 | 3e-077 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FJN7 Putative uncharacterized protein | 640 | 8e-065 |
| Q676Z5 CBS1 (Fragment) | 632 | 7e-064 |
| B9I794 Predicted protein | 623 | 8e-063 |
| C6T3K4 Putative uncharacterized protein | 617 | 4e-062 |
| C6SZ25 Putative uncharacterized protein | 615 | 7e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10860.1 CBS domain-containing protein | 737 | 3e-078 |
| AT1G47271.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT5G10860.1); Has 5358 Blast hits to 5270 proteins in 1084 species: Archae - 620; Bacteria - 3536; Metazoa - 1; Fungi - 100; Plants - 159; Viruses - 0; Other Eukaryotes - 942 (source: NCBI BLink). | 339 | 4e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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