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Information for unigene UN82054

FASTA Sequence
Unigene ID: UN82054Length: 819 SSR 
TGGGTTCTACAGGAAACCCTAATCTATGGGATCAATACGATTCATACAGAGACTGCTCACAAGGAGTATGCAGCGTCTACTGCCCT
GAATGGTGTTACATCATCTTCCCTCCTCCTCCTTCCTTCTTCCTCGACGACGAAGACTCCTCCTCCTCCTCCTCCGACTTCTCTCC
TCTCCTCATCGCTCTCATCGGAATCCTCGCTAGCGCCTTCATCCTCGTCACATACTACACACTCATCTCCAAGCACTGCCACCGCT
CCTCCACAACTTCAGGAGCGATCATCTCTTCCTCCTTCACCGACACTTGGCAGAGAAACAACGAAGCTTCGAATCCGAACGGAGGT
GGAGTCGATGAGACTCTGATTAAATCGATAGAGGTTTACAGATACAGGAAGGGAGATGGATTCGTGGAATCTTCAGATTGCGCTGT
GTGCTTGAGCGAGTTTGAGGAGGAGGAGAGATTGAGATTGCTACCTAAATGCAGCCACGCGTTTCACGTGCCTTGTATTGATACTT
GGTTGAAATCTCACTCTAACTGTCCTCTCTGTCGCGCCGGGATCATCGTAACCGTCACTAACGCCGTCGAATCCAATCAATCGATC
GCCACGGAGTCTGCAGAGATTCAATCGGTTTCGATCGATTCCGTCGTCGTTAACTTAGATCTGGAAACCGGATCTCGGGATGAGAC
GGTTGTTGTTGCTAACGTGAACGGTGGATCGACGCCGAAACCACCGGAACTTCGGGGAACTAGAGGCGGAGAGCATCAAGTGAATC
GGAACTCAGGTGACGTGGTACTGGTCGCGGATATACTCCGGGAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884394 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8731e-091
NP_197262 RING-H2 finger protein ATL52 [Arabidopsis thaliana]7125e-073
BAE98353 RING-H2 zinc finger protein-like [Arabidopsis thaliana]7125e-073
XP_002873838 hypothetical protein ARALYDRAFT_488627 [Arabidopsis lyrata subsp. lyrata]7125e-073
XP_002319229 predicted protein [Populus trichocarpa]6453e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q9LF64 Probable RING-H2 finger protein ATL5G7122e-074
Q9SRQ8 RING-H2 finger protein ATL3A4892e-048
Q8LFY8 RING-H2 finger protein ATL1O3252e-029
Q9LX93 RING-H2 finger protein ATL5F2704e-023
Q8GW38 RING-H2 finger protein ATL1D2695e-023

TrEMBL top hits (Blast detail)Scoree value
Q0WWZ5 RING-H2 zinc finger protein-like (Fragment)7123e-073
B9I6S0 Predicted protein (Fragment)6452e-065
B9SDD7 Ring finger protein, putative6291e-063
B9IPY8 Predicted protein6156e-062
B9GZ88 Predicted protein5914e-059

Arabidopsis top hits (Blast detail)Scoree value
AT5G17600.1 zinc finger (C3HC4-type RING finger) family protein7122e-075
AT3G03550.1 zinc finger (C3HC4-type RING finger) family protein4891e-049
AT1G72220.1 zinc finger (C3HC4-type RING finger) family protein3251e-030
AT4G33565.1 protein binding / zinc ion binding2938e-027
AT5G10380.1 RING1; protein binding / ubiquitin-protein ligase/ zinc ion binding2704e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  100%

Unigene Members