Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN82100

FASTA Sequence
Unigene ID: UN82100Length: 697 SSR 
CTTTCTCTTGCCAAAAGAGAGAGAGAGAGATAACAAAATAACAAAACGGAAACGAGAAGAAGAATCCTATACATATCTGTCATTTT
TCAAAAGAACAAAATGTTGGACGCTCTTTTTAAACCCAAATTCTATACGAAATGCAAGAACTTGGTAAAGATAACGAAAACAAGAG
TGGAGACCGTGAAGAGGAAGAAAAACTCTGTTTGCAAATATTTGAAGAAGGACATTGTCGATCTTCTAAACAACAGCCTCGATTAC
AATGCTTATGGCAGGGCACAAGGGCTTATTGAGGAGAAACGGAGGTTGTCTTGTTATGAGTTTTTGGAGCAATTCTGTGTCTGTGT
TGCATCCAATGTATCTCTCTTACAGAATTCAAGTAATAATACAGTAAATGCCCCGAGGAGTGTCGCGAGGCCATCTCCTCCCTTGT
GTACGCGGCCGCTAGAGTCTCTGAAGTGCCTGAGCTTCGCGATCTCAGATCTTTGTTTGCTGACAGATACAGGACTAATTCACTTG
AACAGTTTGTGAACCCTGAGTTTGTGGAGAGATTCAAAGCGGAGCCCCCGTCAAAGGAAATGAAGGTAGAGCTTCTCCAGGAGATT
GCCATAGAGTACTCCATCAAATGGGATGCCAAGTCTTTAGAGCAGAAGCTCTACCCAAAAACAAAGGCCAATTATAATCCTGGAAA
GACGAATGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001031304 Regulator of Vps4 activity in the MVB pathway protein [Arabidopsis thaliana]5271e-051
AAG52247 unknown protein; 49130-47169 [Arabidopsis thaliana]4302e-040
NP_178109 Regulator of Vps4 activity in the MVB pathway protein [Arabidopsis thaliana]4302e-040
XP_002889320 hypothetical protein ARALYDRAFT_477272 [Arabidopsis lyrata subsp. lyrata]4086e-038
XP_002516070 conserved hypothetical protein [Ricinus communis]2931e-024

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q2V4B8 Putative uncharacterized protein At1g79910.25421e-053
Q8L402 Putative uncharacterized protein At1g799104301e-040
Q9CA94 Putative uncharacterized protein F19K16.134301e-040
B9RQQ1 Putative uncharacterized protein2939e-025
B9GFN8 Predicted protein (Fragment)2884e-024

Arabidopsis top hits (Blast detail)Scoree value
AT1G79910.2 unknown protein5428e-056
AT1G79910.1 unknown protein4308e-043
AT4G32350.1 unknown protein2523e-022
AT1G52315.1 unknown protein2263e-019
AT2G14830.1 unknown protein1403e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  100%

Unigene Members