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Information for unigene UN82220

FASTA Sequence
Unigene ID: UN82220Length: 840 SSR 
GGATGATGAAAGCAAACAACTTCTTGTGATTGGTTTTTTATTTTCACTACTCCTTTTGGTCGACGCTCACACAACCGAGTCAATAT
CAGAGCATGAAGAGAACGCAAACGCAAAAGCTGTGACCATAGAGGATCAAAAACAGATAAACAGAGGAAGACGCAGTGGTAGCGGT
CAGAATCGTGGACGCAGAAGCTGCGATCCACTCTACCAATACTTATTCGGAGTCTGTGGCCGTTGGCCTTTTCCTACAACACCTTC
ACCGGATAACCCTTTTCTCCCTTTTCAACCACCACGTTCACCACCGCGTCCGAGACCACGTTCACCACCGCGTCCGAGACCACGTC
CACCACCGTTGGTTCCATCTCCACCACCACCACGGCCACCACCTCGTCCAAGACCGCGTCCAAGGCCAACACCACCACCGCTAGTT
CCATCACCACCACCACCACCCCCTACGCCTCTTGTTCCTTCACCTCCTCCTCCATCTCCGCCACCGATTTTCTTATTCCCTTCGCC
GCCACCACCAGTGCTAGCGTTCCCGCCACCGTTGGTTCCATCTCCTCCTCCGCCACAGCCACCGCCATTATGGCTGCCTCCACCTG
TGTTCACTCTTCCACCGCCACTCGATGAGTTTCCACCTATGCCACCAATAGTTTGGCTGCCTCCTCCGGATGTTCCCGGCCAATCC
TCGCCAGCGGAGGACTTTGATCTGATTCCACCTTAGTTAATGTAAACACCTACGTTGTAAGTTGTAACATAAGGTCATGTTCTGTT
TTGCCTCTCCAGCGTGTAAGATTATTAAATAAGTGTATGTCTAATGTAACGGAACAATTTTGATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF82153 Contains similarity to extensin (atExt1) from Arabidopsis thaliana gb|U43627 and is rich in proline and glycine. EST gb|Z37262 comes from this gene8424e-088
CAD22154 pherophorin-dz1 protein [Volvox carteri f. nagariensis]4033e-037
YP_294122 hypothetical protein EhV364 [Emiliania huxleyi virus 86]3783e-034
EGV45412 hypothetical protein IAM_21956 [Escherichia coli XH001]3693e-033
ZP_06802068 hypothetical protein Mtub2_18219 [Mycobacterium tuberculosis 210]3613e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q9T0K5 Leucine-rich repeat extensin-like protein 33475e-032
Q9FPQ6 Vegetative cell wall protein gp13412e-031
P10495 Glycine-rich cell wall structural protein 1.03377e-031
P09789 Glycine-rich cell wall structural protein 13261e-029
P03211 Epstein-Barr nuclear antigen 13091e-027

TrEMBL top hits (Blast detail)Scoree value
Q9LMQ1 F7H2.17 protein8423e-088
Q4A2S9 Putative membrane protein4086e-038
Q8L685 Pherophorin-dz1 protein4032e-037
Q4A2B5 Putative membrane protein3971e-036
Q0BCI9 Putative uncharacterized protein3575e-032

Arabidopsis top hits (Blast detail)Scoree value
AT4G13340.1 leucine-rich repeat family protein / extensin family protein3601e-034
AT2G36120.1 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1)3332e-031
AT2G05580.1 unknown protein3162e-029
AT2G32690.3 GRP23 (GLYCINE-RICH PROTEIN 23)3044e-028
AT3G20470.1 GRP5 (GLYCINE-RICH PROTEIN 5); structural constituent of cell wall3027e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  100%

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