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Information for unigene UN82372

FASTA Sequence
Unigene ID: UN82372Length: 582 SSR 
AAAATAAAGAGGTAGTAATCAAGTAGAACTAGCAGCTTCACTCAGCAACCATCTCCTTAGTGTGAAAGCCACAAAGTTTTTACTTG
CAAGTAACTTCGTCTTCAACATAGCTAACCTACCACCACCACCACCTGCAACCTCTCCATCCCCACCACCATCAGCAACCGGCGTC
AGCACCTCCTCAACCACCGTCTCAAGACCTCCCCCACCATCCTCACTTCCCATGACCTGACCTTTGGTCTCATCTCCATCCATACT
CACCACCAACGTCCTCCTCCGTTCCCGCAGCCACTCCCTGACATCCCCTGTAACAACAATACACTTCTTCACCTTCAGCTTCACCA
GATTAGGACACCCCAACGCAAGCGCCTTGATCCCAACATCCGTAACCGGACATCCCTTGATACAGAACTTCCTCAACGCCACGCAC
TTCTCCGCGATGCAAGCCATCTCCACATCCCCAATCGCACCACTCCCACAAAGAGCCAACCGTTCCAGCTTCTTACAGTTCGAAGC
AATAGCAGACAAGCTCGCATGCGTCGCGTCAACACCGATAAGCACAAGCTCTTGCAGTAACAAACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566928 F-box/LRR-repeat protein 16 [Arabidopsis thaliana]6522e-066
XP_002876014 vier F-box protein 2 [Arabidopsis lyrata subsp. lyrata]6478e-066
NP_569047 F-box protein SKIP2 [Arabidopsis thaliana]6012e-060
BAE98487 hypothetical protein [Arabidopsis thaliana]6002e-060
XP_002865015 hypothetical protein ARALYDRAFT_919984 [Arabidopsis lyrata subsp. lyrata]5761e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q9SN10 F-box/LRR-repeat protein 166521e-067
Q9FE83 F-box protein SKIP26019e-062
Q9S9X4 Putative F-box/LRR-repeat protein 84092e-039
Q9C626 F-box protein At1g470563374e-031

TrEMBL top hits (Blast detail)Scoree value
A3KPF1 At3g500806521e-066
B9HHB3 Predicted protein4362e-041
B9MVV4 F-box family protein4325e-041
Q84QE1 Avr9/Cf-9 rapidly elicited protein 1894227e-040
B9SFZ9 Skip-2, putative4219e-040

Arabidopsis top hits (Blast detail)Scoree value
AT3G50080.1 VFB2 (VIER F-BOX PROTEINE 2); ubiquitin-protein ligase6521e-068
AT5G67250.1 SKIP2 (SKP1/ASK1 INTERACTING PROTEIN 2); ubiquitin-protein ligase6019e-063
AT4G07400.1 VFB3 (VIER F-BOX PROTEINE 3); ubiquitin-protein ligase4092e-040
AT1G47056.1 VFB1 (VIER F-BOX PROTEINE 1); ubiquitin-protein ligase3374e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  100%

Unigene Members