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Information for unigene UN82389

FASTA Sequence
Unigene ID: UN82389Length: 832 SSR 
GCGATGCAAATCAAAGGAAACTTATCATTTAGTGAACATGCGAATTAACATTTCGTTTAAGGCAAACAAGACATAAACGATCTGTT
ACAGCAAAAAAGTGAACAAGAACCAAACCAAACCAGACGGAACCAAATCTAAAGCGAAAACAGAGAGAAGCAGACAACAACGCCAT
AATGGTTGATTACCAGCCACCACCACCTCCGCCGCTTCCTCCGTAAGCACCATCACCACCTCCGTAACCACCTCCATCACGTCTGC
CACCACCACCGTAGCCGCCACCACCACCACCGTATCCACGACCTCCACCACCACCAGATCCGTAACCTCCGCTACGTCTGTCACCA
TATCCACCGCCTCCTCCACCGTATCCACCTCCACCGCGGCCTCCGTATCCGCCACCACCACGGCCTCCACCACCGCCGCTTCCTCT
AGACTGAGCCTCGTTGACGGTAATGGTACGGCCGTCAAGCTCCTTTCCGTTCATCTCCTCGATAGCATCCCTCATGGATTTCTCAT
CCTTGAAGGTAACGAATCCGAATCCCCTTGATCTTCCAGTCTCACGATCGTTAATGATCTGTCAATCAAAACAATAATCAGCAAAA
AAAACAATTAGCTTAAGAAGAAGAAGAAGAAGAAAAAGCGAATATGTAAAACAAAGAAGAAATCGAACGTTCTCCGGGCTGATAAA
AGCAGCAGCAGGAAGATTAACGTACCGATTTGGGGACAAAGCAAGTAACAGTAGTAGTAACAAAGAACATAGTAATCGAATCAAGT
AACAGACAGAGAAACACAGATCGGAATCAGATCCGTCGAGGATCAGAACCATCGGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
Q05966 RecName: Full=Glycine-rich RNA-binding protein 106435e-065
XP_002868897 hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp. lyrata]5826e-058
BAJ34207 unnamed protein product [Thellungiella halophila]5782e-057
P49311 RecName: Full=Glycine-rich RNA-binding protein GRP2A5639e-056
ACJ04160 putative glycine-rich RNA-binding protein [Chorispora bungeana]5558e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q05966 Glycine-rich RNA-binding protein 106432e-066
P49311 Glycine-rich RNA-binding protein GRP2A5634e-057
P49310 Glycine-rich RNA-binding protein GRP1A5294e-053
Q03251 Glycine-rich RNA-binding protein 85294e-053
Q03250 Glycine-rich RNA-binding protein 75195e-052

TrEMBL top hits (Blast detail)Scoree value
B6VA25 Putative glycine-rich RNA-binding protein5555e-055
B9DFJ8 AT4G39260 protein5296e-052
Q9FUD5 Glycine-rich RNA-binding protein4973e-048
Q08I87 Putative glycine-rich RNA-binding protein4892e-047
Q2VCI6 Putative glycine-rich RNA binding protein-like4857e-047

Arabidopsis top hits (Blast detail)Scoree value
AT4G39260.1 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding5303e-054
AT2G21660.1 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding5204e-053
AT2G21660.2 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding4496e-045
AT4G39260.2 GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding3672e-035
AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding3663e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  100%

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