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Information for unigene UN82438
| FASTA Sequence |
| Unigene ID: UN82438 | Length: 864 |
SSR | | CTTGCAGATTCTCAATTGGGTCGGCACGATTAGCTGAAAAGGTCACACCTTTGGTCTTAATCCGCCAAAAAGTCATTTTTTTCTCT
CTCTCTCTCTCAGATCTTGCAGTGTCGGTTACTCCCAGATTTCGATTACTAGAATGGGAAGGCCTTTGCTTTACGACATCGTCGAG
AAACCCGCAACGAGCTGCATCGTAACCCTATGCAGCTTAATCTGGTTCCTGATTCAGAAGAAGAGCATTGGTTACCCCCAAGTTGG
GTTGAGCTACGAGACCGCGGTTCAGGGGCATTACTGGAGGATGATCACCTCTGCTTTCTCTCATATCAGCGTCTTGCATCTCGTCT
TCAACATGAGTGCCTTGTGGAGTCTCGGTGTTGTGGAACAGCTTGGTCACTTAGGTCTCGGAACTGCTTATTACCTTCATTACACT
CTTGTTCTCGTCGTCTTCTCTGGTGTTTGGTGATTGGGATGTACCATTTACTGATCGGTAGGTTCAAGATCGAGTATTTCAGGAGG
GTTACCGCTGTGGGTTACTCTTGTGTTGTGTTTGGTTGGATGACGATTTTGTCTGTGAAGCAGCCTTCTTCGAAGCTTGATCTCTT
TGGGGTTCTGTCTCTTCCCATTAGCTTCGCGCCCTTTGAGTCGCTTATTTTTACTTCTATTATTGTTCCGCAAGCTAGCTTTCTGG
GACATTTGTCGGGGATACTTGTTGGTTATGCTATCTCCTGGGGTTTGATTGGTGGGATGAACAACTACTGGGCTGTTACCATGCTT
GGTTGGATCGTTGTGGTGTTTGTCTTCAGTTGAAGAAGTCTGGTGCTTATGATTTCAGTTTTCTTGAGATCGAGTCGGTCAGTGAT
GCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876508 rhomboid family protein [Arabidopsis lyrata subsp. lyrata] | 578 | 2e-057 |
| NP_191511 RHOMBOID-like protein 13 [Arabidopsis thaliana] | 576 | 3e-057 |
| XP_002310428 predicted protein [Populus trichocarpa] | 550 | 3e-054 |
| ADN34087 rhomboid protein [Cucumis melo subsp. melo] | 550 | 3e-054 |
| XP_002529496 Rhomboid protein, putative [Ricinus communis] | 542 | 3e-053 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M1B5 Putative uncharacterized protein T16L24.70 | 576 | 2e-057 |
| B9HH36 Predicted protein | 550 | 2e-054 |
| B9SU27 Rhomboid protein, putative | 542 | 2e-053 |
| A5BJP0 Putative uncharacterized protein | 541 | 2e-053 |
| B9MY59 Predicted protein | 535 | 1e-052 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G59520.1 ATRBL13 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 13) | 576 | 1e-059 |
| AT3G58460.1 ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15) | 118 | 2e-006 |
| AT3G17611.2 ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14); zinc ion binding | 117 | 2e-006 |
| AT3G17611.1 ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14); zinc ion binding | 117 | 2e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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