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Information for unigene UN82490
| FASTA Sequence |
| Unigene ID: UN82490 | Length: 732 |
SSR | | AGAGAGAGAGAGACACAAAGTCACACACAGAAGAGTGAAAATGGCAGCGACGACTTTGTCAATCGCGAGCTCGATCCGCTCCTCTT
CTTCCCCCACTCTCGCTTCCCTTCTCACTCCCCCGCATTCACATTCCCATCTCGCTTCGGTTCATCTCCCTCCACACTACTAACCC
ACCTCTGTCCCATCGCCGCCGTGGAAGCTCGGGAGAAGATCGAGAATATCGGATCCGAAATCTCATCCCTCACTCTGGAAGAAGCC
CGCGTCCTCGTCGATTACCTCCAGGACAAGTTCGGCGTCTCGCCGCTCTCCTTAGCTCCCGCTGCAGCGGCTGTGGCTGCTCCGGG
AGACGGCGGCGGTGCGGCGGCAGCGGTGGAGGAGCAGACGGAGTTCGACGTGGTGATCAACGAGGTACCCAGCAATGCGCGTATCG
CGGTGATCAAAGCGGTGAGGGCGTTGACTAGCTTGGCGCTGAAGGAAGCGAAGGAGCTTATAGAAGGGTTGCCGAAGAAGTTTAAG
GAAGGTGTGACCAAGGACGAAGCTGAAGAGGCTAAGAAGCAGCTTGAAGAAGCTAATGCTAAGGTTTCCATTGCCTAAGCTTTTAA
CAGTGGCGAGTTTATAAAAAAAAAATGTGTTATTTTTTCGGAATTTCATGGATCTTTTTTCGTGTGGTTAGTATAGTTTGCGTTTG
GAATTGTCGAAATCTTAATCAATTTGCTTTCCCCCACTACTGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189421 50S ribosomal protein L12-1 [Arabidopsis thaliana] | 645 | 2e-065 |
| XP_002875406 ribosomal protein L12-C [Arabidopsis lyrata subsp. lyrata] | 623 | 8e-063 |
| XP_002875404 ribosomal protein L12-A [Arabidopsis lyrata subsp. lyrata] | 622 | 1e-062 |
| NP_189423 50S ribosomal protein L12-3 [Arabidopsis thaliana] | 620 | 2e-062 |
| CAA48183 ribosomal protein L12 [Arabidopsis thaliana] | 620 | 2e-062 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P36210 50S ribosomal protein L12-1, chloroplastic | 645 | 1e-066 |
| P36212 50S ribosomal protein L12-3, chloroplastic | 620 | 8e-064 |
| P02398 50S ribosomal protein L12, chloroplastic | 533 | 1e-053 |
| P36211 50S ribosomal protein L12-2, chloroplastic | 516 | 1e-051 |
| P24929 50S ribosomal protein L12, chloroplastic | 508 | 8e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LBJ7 50S ribosomal protein L12-C | 616 | 4e-062 |
| Q53WU1 SocL12 (Chloroplast ribosomal protein) | 533 | 2e-052 |
| A9PBU0 Predicted protein | 502 | 6e-049 |
| B6UIC1 50S ribosomal protein L12-1 | 422 | 1e-039 |
| A9NQH6 Putative uncharacterized protein | 419 | 3e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G27830.1 RPL12-A (RIBOSOMAL PROTEIN L12-A); structural constituent of ribosome | 646 | 8e-068 |
| AT3G27850.1 RPL12-C (ribosomal protein l12-c); structural constituent of ribosome | 621 | 6e-065 |
| AT3G27840.1 RPL12-B (ribosomal protein l12-b); structural constituent of ribosome | 517 | 7e-053 |
| AT4G37660.1 ribosomal protein L12 family protein | 200 | 4e-016 |
| AT1G70190.1 ribosomal protein L12 family protein | 176 | 2e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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