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Information for unigene UN82542

FASTA Sequence
Unigene ID: UN82542Length: 810 SSR 
CAATCGGGTGACAAAGAAGATCAAAACCCTAGAAAATTCTACTCTCGATTCCTCTTCAAAGCGCTAATCCTGGCCCTGTTATGCTC
CCTCGTACCTGTCTTTCTTTCTCAGACGCCAGAGCTCGCCAACCAAACCAGACTCCTCGAGCTTCTCCACATGATTTTCGTCGGCA
TCGCCGTCTCCTACGGCCTCTTCAGCCGCCGGAACTACGACGGAGGAGGAGGAGGAAGAGGAAGCAATAACGATCATAATAATAAT
ACTAATAATCCTCATCCCTATGTGCCTAAGATTCTTGAAGTATCATCCTCTGTTTTTAACGTGGATCACGAGAGTGGATCCGATGA
TTCCTCCGGCGACCACCCCCACCCCCACCGTAGGATTCAGAACAAGTACCAGACCAAAAGTACAGAGACTGGTCTTTCCAAAGACA
ACGAGAGTCGCTTCGTTGATCGAGTGAGTTCAGGGGTCAGAGAAAAGCCTCTGCTTTTGCCTGTTCGAAGCTTGAACTACTCTCAC
CTTTCTGATTCCGGCGATGGCTCCGGCAGATGGGAGAGAGTGAGATCAAAGAGACAGCTCCTAAAGACTCTCGTTGATGATGATAG
CACTGATGCGCTTCCTTCTCCGATTCCATGGAGGTCAAGATCATCAATGGAGATTGAATCTCAGCCGTTGATCAAGACTCCGGCGA
GTCTGACGTCATCTTCCGCTTTGTCTTCTTCGCCGAGAAAGTCGACGCCTTTACCTAAGCTCACATCGGAGTCTGGAGCGAAATCG
GCTGAGGACACCGTGCGGAAGAAGGAGCTTCACTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB88077 hypothetical protein [Arabidopsis thaliana]8147e-085
AAM63519 glycoprotein homolog [Arabidopsis thaliana]8147e-085
NP_193412 hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]8093e-084
CAB96200 hypothetical protein [Capsella rubella]8031e-083
XP_002868098 hydroxyproline-rich glycoprotein family protein [Arabidopsis lyrata subsp. lyrata]7852e-081

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LCM1 Glycoprotein homolog8145e-085
Q9M3R6 Putative uncharacterized protein (Fragment)8145e-085
Q9SUK6 AT4g16790/dl4420c8092e-084
Q9LEM1 Putative uncharacterized protein8039e-084
B9SZP6 Putative uncharacterized protein2706e-022

Arabidopsis top hits (Blast detail)Scoree value
AT4G16790.1 hydroxyproline-rich glycoprotein family protein8091e-086
AT3G60380.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 5716 Blast hits to 3635 proteins in 329 species: Archae - 2; Bacteria - 249; Metazoa - 2628; Fungi - 569; Plants - 209; Viruses - 24; Other Eukaryotes - 2035 (source: NCBI BLink).1522e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  100%

Unigene Members