Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN82544

FASTA Sequence
Unigene ID: UN82544Length: 774 SSR 
ACCTAAGCAAAAAAAACATTACTTTTCAAATTTTTATTAATTATATAATAAATGAACTCAACGTACAACGACCACCACCATCTGAA
AAGAGAGCCTAATGACAACTCCGGCGTCGGAATCATATACCCTCCGTCGCCTTCTCCGTTGCTAAAACTAAACAAAGACTCTCACG
TCATCAAAAAGCCACCTTCGCCGTCTTCTTCCTCCTCCGCAGCCGCGAAGCCTCGCCAGCCGGTGATCATCTACACGAACACGCCC
AAAGTCATACACACCAATCCTAAAGACTTCATGGCCCTCGTCCAGAAACTCACCGGTATGTCCCACTCCGAGGAAGACTCCAGCAT
AACGGATCGCGGAGGAGGAGGAGGAAAATCAATCAACCGGAGCGTCTCTGATCTCACCGTCGACAGAAAAGTTAACCGGACTCGCT
GCGGCGGCGGCGGTGGAGGTGGTGGTGGCGGTGGTGGAAATAACAGCTACAACAGAAGCTATTCTGGTTCAGGGAAAGGGATTTTC
TTCAGCAATATTTGTGAAGACAGTGAATCATCGTCGGTGATCACAACCGATGAGAACATGGGAGGAGGAGGAGGAGGAGGAGAGCA
TGGTGGTGTACATGTTAACTCGTCTCTACCGTATTCAGCGGTGGCTGTTTCTCCTTTTACTCATCCTCAGCAGCCACCACCACCAC
CACCTCCACCGCTTCCTCCTCAGTCTATGTACGATGGGACGGCGAATGGGATTAACTACAGCTCTTACTTCTCGACGCTTTTGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885253 hypothetical protein ARALYDRAFT_479336 [Arabidopsis lyrata subsp. lyrata]6963e-071
NP_188465 VQ motif-containing protein [Arabidopsis thaliana]5351e-052
CAN73469 hypothetical protein VITISV_000273 [Vitis vinifera]2026e-014
XP_002279391 PREDICTED: hypothetical protein [Vitis vinifera]2026e-014
XP_002306685 predicted protein [Populus trichocarpa]1892e-012

Swiss-Prot top hits (Blast detail)Scoree value
A2ZJC9 Putative glycine-rich cell wall structural protein 11243e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LS54 At3g183605351e-052
A5AJM8 Putative uncharacterized protein2024e-014
B9H7P8 Predicted protein1891e-012
B9IE40 Predicted protein1792e-011
B9I2L4 Predicted protein1782e-011

Arabidopsis top hits (Blast detail)Scoree value
AT3G18360.1 VQ motif-containing protein6862e-072
AT1G68450.1 VQ motif-containing protein1476e-010
AT4G36230.1 unknown protein1306e-008
AT1G21326.1 VQ motif-containing protein1234e-007
AT1G59910.1 formin homology 2 domain-containing protein / FH2 domain-containing protein1181e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  100%

Unigene Members