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Information for unigene UN82568

FASTA Sequence
Unigene ID: UN82568Length: 857 SSR 
ACCTTGCTCAGTTGCCAAATTGATTTGCATTCATCTTCTCCTTCCCACGCCCCAATCTCTCTACTTCTCCGATCACTTGGATCGGG
GAATCCACTCGATTAGGCTCTCTTTCCGATTGTGTTCCGATGACGTGTCCGGTAGACGAAAAGACACTTCTTTTGCCGCGGATGAA
AGTCGAAGATGACGTCGAGAAAGGGGTTTATGTGAAACTGAGCGAGGGTCAAGAAGAATCATCAGGGCAGGAGGAGGAGAAGGAAG
AAGAAGAAGAAGTAAAGGAGGAGGCTGCTACGTCGCCGTTTTGGTTCTGGTTCAAGCTTGCTCTTTTATTCTCTTTCCTTGCTGCC
TTGGCTTTCGTTGCTTACAGATGGGTCGGTCCTTTAATCATGGACAAGGAGCTTATCCCGATTATAAAATGGGAGATAAGGACTTT
CACACATCCCGTGTGCGGTCTTCTTGTCTTTGCATCCGTAGCTGTATTCCCCACTATACTTCTTCCCTCTACTCCCTCCATGTGGA
TTGCTGGGATGACCTTTGGTTATGGCTACGGCTTTCTACTTATTATCTCTGCTGCATCTCTTGGTGTCTCCCTTCCTTACTTCATT
GGTCATCTCTTCCGCCACAATATTCAAGGATGGTTGGAAAGATATCCTGATCAAGCAGTGGTATTAAGAGCTGCGGGTGAAGGGAA
CTGGTTTCACCAGTTTCGAGCTGTGACTCTAATCCGGATTTCTCCATTCCCTTACATTCTTTATAACTACTGCTCTGTAGCAACTC
GTGTTAAGTACGGTCCTTACATCACCGGATCTCTCTTAGGCATGGTGCCCGAGATCTTTTGTGCTATCTATACAGGGAATCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194016 SNARE associated Golgi protein family [Arabidopsis thaliana]9912e-105
NP_001154265 SNARE associated Golgi protein family [Arabidopsis thaliana]9912e-105
XP_002869802 hypothetical protein ARALYDRAFT_492585 [Arabidopsis lyrata subsp. lyrata]9796e-104
BAJ34216 unnamed protein product [Thellungiella halophila]8935e-094
NP_192937 SNARE associated Golgi family protein [Arabidopsis thaliana]8075e-084

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q84JU5 Putative uncharacterized protein At4g228509912e-105
Q9SZ65 Putative uncharacterized protein AT4g120008073e-084
B9RBV9 Putative uncharacterized protein8002e-083
B9GVU8 Predicted protein7832e-081
B9GKS8 Predicted protein7643e-079

Arabidopsis top hits (Blast detail)Scoree value
AT4G22850.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12000.1); Has 1331 Blast hits to 1328 proteins in 349 species: Archae - 4; Bacteria - 600; Metazoa - 103; Fungi - 64; Plants - 162; Viruses - 0; Other Eukaryotes - 398 (source: NCBI BLink).9972e-108
AT4G22850.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12000.1).9972e-108
AT4G12000.1 INVOLVED IN: response to oxidative stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22850.1); Has 1153 Blast hits to 1150 proteins in 277 species: Archae - 2; Bacteria - 485; Metazoa - 104; Fungi - 24; Plants - 140; Viruses - 0; Other Eukaryotes - 398 (source: NCBI BLink).8072e-086
AT1G12450.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22850.1); Has 1233 Blast hits to 1230 proteins in 347 species: Archae - 2; Bacteria - 557; Metazoa - 104; Fungi - 72; Plants - 132; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink).7525e-080
AT2G02370.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12450.1); Has 1745 Blast hits to 1745 proteins in 446 species: Archae - 2; Bacteria - 792; Metazoa - 108; Fungi - 97; Plants - 119; Viruses - 0; Other Eukaryotes - 627 (source: NCBI BLink).5151e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  100%

Unigene Members