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Information for unigene UN82706
| FASTA Sequence |
| Unigene ID: UN82706 | Length: 668 |
SSR | | GCTCTCTCTCTCTCGAAAAAGCTAATGAGAGAAATTAATCCGACGGCATAATCTGAGAAGAGTTTGGTGAGTACCGGCGGTGGATC
CGACGGAGATGGCAAAGAGTGAATTTTTCGATTCGGATCCGACGGTAATTGCCAAGGCGAAGGAGCTGAAGCGTGAGATGAAGAAA
CTGCTTCAGACCATCGAAGAAGGCGATGATTTTAGCGTTCGGACAATCGATCAGTTGCAAGAAGCTTTGTCTGCTTTCAAACAAGC
GAAGACGAAGAAGATGGCGAAATCTTCTTCTCTTGAGATGCTCGTGACAGTGTCTTGTCCCGATGAGTTTCGCTGTCCTCTGTCTA
ACGAGCTCATGCGTGATCCTGTCGTTTTGGCTTCTGGTCAGACATATGATAAGTTTTACATACAGAAGTGGTTGAGTTCTGGAAAC
AGAACATGTCCCAAGACTCGGCAAGTTCTGTCTCACACAGGTTTAACTCCCAATCTCTTAATTAGTGATATGATCTCAAAATGGTG
CAAAACGGTTGGGGTAGAGACGGTGAATCAATATCAGTCCAACACTCTATCAGATCGTGAGATTTTGAACTCCTTGCTCTGTAAAG
TCTCGTCATCGAATCTTCAAGACCAAAAATCAGCTGCGAAGGAGCTAAGGCGTTTAACCAGGAAAG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002862652 armadillo/beta-catenin repeat family protein [Arabidopsis lyrata subsp. lyrata] | 742 | 1e-076 |
| NP_566304 U-box domain-containing protein 9 [Arabidopsis thaliana] | 729 | 3e-075 |
| XP_002533499 Spotted leaf protein, putative [Ricinus communis] | 509 | 1e-049 |
| XP_002301810 predicted protein [Populus trichocarpa] | 489 | 2e-047 |
| XP_002263607 PREDICTED: hypothetical protein [Vitis vinifera] | 435 | 4e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SRT0 U-box domain-containing protein 9 | 729 | 2e-076 |
| A2ZLU6 Protein spotted leaf 11 | 285 | 5e-025 |
| Q0IMG9 Protein spotted leaf 11 | 285 | 5e-025 |
| Q8GUG9 U-box domain-containing protein 11 | 271 | 2e-023 |
| Q681N2 U-box domain-containing protein 15 | 258 | 7e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T5I0 Spotted leaf protein, putative | 509 | 8e-050 |
| B9GQP0 Predicted protein | 489 | 2e-047 |
| B9N7X2 Predicted protein | 428 | 2e-040 |
| B9NCV7 Predicted protein | 399 | 4e-037 |
| B9NCV9 Predicted protein | 393 | 2e-036 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G07360.1 PUB9 (PLANT U-BOX 9); ubiquitin-protein ligase | 729 | 2e-077 |
| AT1G23030.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein | 271 | 2e-024 |
| AT5G42340.1 binding / ubiquitin-protein ligase | 258 | 6e-023 |
| AT1G27910.1 PUB45 (PLANT U-BOX 45); ubiquitin-protein ligase | 255 | 1e-022 |
| AT3G54850.1 PUB14; ubiquitin-protein ligase | 246 | 2e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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