Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN82747

FASTA Sequence
Unigene ID: UN82747Length: 827 SSR 
ATTAAAAAGAGCAAAGACATGATGATGATGATGATTTCTATATCTCTTGACCGCTTTGCCCGTTCCTGTCTTCTCTCTCTCTAGAC
ATGACATGAGAATTCCCTTTTTTTGACTAAAATTCTCTATCTGCTTTTTTAAAAAAATCCAGTTTTGAGTGAATCTTACTTCTTCT
TCTTCTTCTTTAGATTCCGTCAAAGTTATGGAAGATTGGCAATCCAATAACAAATCTCATAATGCCAGAAACAGTGACAGTGAAGA
AGAAGAAGGAAATGGGTGCTGCTGGATCAAATTAAGGGTCATGCTTTGTTGCGTAGCTTCCACATCAGACGTTGATAGCTCTCTCA
GCGTCTCCACAACCACTCTGGGAAGTAAATCTCCAATTTTGAAATCCAATGATCATCAACCGGCTGGCCCTGTTTCTTCTACCACA
ACCACAACCACTAGCAATGCAGAGAGCTCTCTCTCCACTCCAATCATTAGCGAAGAACTTAAGACCTATTCTCACCTCAACAAGTT
TACCTTCATTGATCTCAAGTTGGCTACTAGAAACTTCAGACCCGAAAGTCTTCTCGGTGAAGGTGGCTTTGGTTGTGTCTTCAAAG
GATGGGTCGAGGAGAACGGCACTGCTCCTGTTAAGCCTGGCACTGGCCTCACTGTCGCCGTCAAAACCTTAAATCCTGATGGCCTT
CAGGGTCACAAAGAGTGGCTTGCTGAGATTCACTATCTCGGGAATCTTCTCCATCCGAATCTTGTTAAACTGGTGGGTTATTGTAT
CGAAGATGATCAAAGGCTGCTTGTTTATGAGTTTATGCCTCGAGGAAGTTTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882187 hypothetical protein ARALYDRAFT_896131 [Arabidopsis lyrata subsp. lyrata]8829e-093
NP_186779 protein kinase domain-containing protein [Arabidopsis thaliana]8667e-091
AAM64595 putative protein kinase [Arabidopsis thaliana]8667e-091
NP_197012 protein kinase family protein [Arabidopsis thaliana]7717e-080
XP_002871647 hypothetical protein ARALYDRAFT_909477 [Arabidopsis lyrata subsp. lyrata]7691e-079

Swiss-Prot top hits (Blast detail)Scoree value
O49840 Protein kinase 2B, chloroplastic4391e-042
O48814 Serine/threonine-protein kinase BIK14381e-042
O49839 Protein kinase 2A, chloroplastic4372e-042
P46573 Protein kinase APK1B, chloroplastic4344e-042
P43293 Probable serine/threonine-protein kinase NAK4327e-042

TrEMBL top hits (Blast detail)Scoree value
Q8LBS0 Putative uncharacterized protein8665e-091
Q9SRH7 At3g013008665e-091
Q9LFP7 Serine/threonine specific protein kinase-like7715e-080
B9IJS8 Predicted protein7195e-074
B9H0D5 Predicted protein7152e-073

Arabidopsis top hits (Blast detail)Scoree value
AT3G01300.1 protein kinase, putative8663e-093
AT5G15080.1 protein kinase, putative7713e-082
AT3G28690.2 protein kinase, putative6217e-065
AT3G28690.3 protein kinase, putative5733e-059
AT3G28690.1 protein kinase, putative5392e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  100%

Unigene Members