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Information for unigene UN82820

FASTA Sequence
Unigene ID: UN82820Length: 862 SSR 
TTCCGGCGGAAGCAGGAGAGCGTGACAAAAAGCCGGTGGCTGTCAGAGTGGCATAGCTGTAAATACGGTGAAGTCTAGGGCCAATA
CTGTCAAAGTGTCAATAGAGTGTAACAGAGAGATTCCTCCAGTTAAAAAGCTTCCCAAGTTTCAAACTCTCCAGAAGGAGATTTCG
AGGAATGTCAAGCGGTCGAAGCACTCACTGGTGCCACAGATGCCAACGCGGTGTCTACCTACGCGGTCCAGATTCCCTCTGTACCT
ATTGTGGAGGAGGGTTTGTCGAGGAAATCGATGTACCACCACCACCACCAATTGATACGCTTAGACCCCACAGAGATGTTGAACGC
GGTCCAACGTATGATCTCATGGAAGCTTTCTCAGCTTTCATGAGAAGCCGCTTAGCCGAAAGAAGCCACGACCGAGATATCACCAC
AAGAATCACCTCTAGTGGTGGTGGTTCAGAAAGCTTCTCGAGTATAGCTCCTTTCTTGATCTTCGGTGGCCAAGCTAATAACACAT
CAGTCGAAGCCTTGCTAAACACCTCACCTGGTATCGGCATCGCTCGTGGTGGAAACACCAATGCTGGTGACTACTTCTACGGACCT
GGTCTCGAGGAACTTATCGAGCAGCTTTCGTCGTCTGGGGGGACTACTACTCACCATCGAGGCCCACCGCCTGCGGCGAAATCATC
TATCGACGCGTTACCGACGGTCAAGATCACGCAGAAGCATCTCAAGTCGTCGGACTCTCACTGTCCGGTTTGTAAAGACGAGTTCG
AGCTCAAGTCGGAAGCGAAACAGATGCCGTGTAAACATGTGTATCATTCCGACTGCATCGTCCCGTGGCTGGTTCAGCACAACACG
TG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567039 RING/U-box domain-containing protein [Arabidopsis thaliana]8783e-092
XP_002879893 ring-H2 finger C1A [Arabidopsis lyrata subsp. lyrata]7986e-083
NP_565942 ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana]7734e-080
XP_002876373 hypothetical protein ARALYDRAFT_324170 [Arabidopsis lyrata subsp. lyrata]7539e-078
CAB88061 putative protein [Arabidopsis thaliana]7134e-073

Swiss-Prot top hits (Blast detail)Scoree value
Q0II22 RING finger protein 1262392e-019
Q9BV68 RING finger protein 1262346e-019
Q91YL2 RING finger protein 1262346e-019
Q6DIP3 RING finger protein 1262311e-018
Q7T0Q3 RING finger protein 126-A2283e-018

TrEMBL top hits (Blast detail)Scoree value
Q94AK4 Putative uncharacterized protein At3g565808782e-092
O22197 At2g408307733e-080
Q9LXY2 Putative uncharacterized protein T5P19_2307133e-073
B9IHK2 Predicted protein6561e-066
B9HDT7 Predicted protein6542e-066

Arabidopsis top hits (Blast detail)Scoree value
AT3G56580.2 zinc finger (C3HC4-type RING finger) family protein8781e-094
AT3G56580.1 zinc finger (C3HC4-type RING finger) family protein8781e-094
AT3G56580.3 zinc finger (C3HC4-type RING finger) family protein8781e-094
AT2G40830.2 RHC1A; protein binding / zinc ion binding7822e-083
AT2G40830.1 RHC1A; protein binding / zinc ion binding7822e-083

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  100%

Unigene Members