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Information for unigene UN82873
| FASTA Sequence |
| Unigene ID: UN82873 | Length: 720 |
SSR | | AAATCACAATTCAAAAATCGGTGGAGATGAGAGAACATAAATCATAACTTTCCCACTTCATTTACTTCTCACACACGCAATCTAAA
CACAATTACAAAAAGCAACAAATAAGAATCCAAAACCGGACCTGTACCGGTTTTAACCCAACGGTCTGGCTATTTCGAAAGAACAC
TCCATTTAGCAAGCAGGATGAGGAAGACGATCAAGAACACAAGCGAAGAAAGACCGATGGCTACACCAAGCACAATCTTGTTAGAC
TCATGTTTCTCTTCCTTCTTATCCCCATCGCCGTAATCTTCCTCCTCCTCCTCATCCTCCTCGGACAACGTCGAGTCCTCCTCCTC
CTCCTCCTCCTTCTGCGGCGGAGACGATAAAGGCAAACCGTATTTATCACACGGAGCAACACCAAGATTCAGTTTCCAAGACAGAA
CAGTGTTGTTATAACAGAGACCGCTGTTCCCTCTGACTTGGAAGAACTCGAGTTGTTTAATGAAGCTCTCGTTAAACGGCAACACT
CCCTGGAAGGAGTTGTCAGCGAGGTTCAAGTGTCTGAGACTCTCCATCCGGGAGAAGAAGCTCGGTACGACGCCGTTCAGCTGGTT
CCCGCTTAGATCCAGATGCGTCAGCCGAGAGAGCGACGAGACCGAGCTTGGGATCGGTCCTGAGAATCTGTTATAAGCCAGTGACA
GGTTCTGCAGCGATGCCAAGTCTCCGATCTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867978 leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata] | 566 | 3e-056 |
| NP_193611 receptor like protein 51 [Arabidopsis thaliana] | 565 | 4e-056 |
| XP_002522237 serine-threonine protein kinase, plant-type, putative [Ricinus communis] | 558 | 3e-055 |
| NP_199389 receptor like protein 55 [Arabidopsis thaliana] | 536 | 9e-053 |
| XP_002316816 predicted protein [Populus trichocarpa] | 535 | 1e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| C0LGQ9 Probable LRR receptor-like serine/threonine-protein kinase At4g20940 | 183 | 4e-013 |
| Q42371 LRR receptor-like serine/threonine-protein kinase ERECTA | 177 | 2e-012 |
| Q9SCT4 Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 | 173 | 6e-012 |
| O82318 Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 | 171 | 9e-012 |
| Q9M8T0 Probable inactive receptor kinase At3g02880 | 171 | 9e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SN38 Putative uncharacterized protein AT4g18760 | 565 | 3e-056 |
| B9S8B8 Serine-threonine protein kinase, plant-type, putative | 558 | 2e-055 |
| Q9FK66 Similarity to unknown protein | 536 | 7e-053 |
| B9I1I5 Predicted protein | 535 | 9e-053 |
| B2ZAT0 Putative leucine-rich repeat family protein | 525 | 1e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G18760.1 AtRLP51 (Receptor Like Protein 51); protein binding | 569 | 6e-059 |
| AT5G45770.1 AtRLP55 (Receptor Like Protein 55); protein binding | 536 | 4e-055 |
| AT2G42800.1 AtRLP29 (Receptor Like Protein 29); protein binding | 186 | 2e-014 |
| AT4G20940.1 leucine-rich repeat family protein | 183 | 4e-014 |
| AT1G33670.1 leucine-rich repeat family protein | 178 | 1e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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