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Information for unigene UN82886
| FASTA Sequence |
| Unigene ID: UN82886 | Length: 770 |
SSR | | TAGAGAGCTTCCTTTTTTTCTTCTATGCGATCAGATTTTCTCAGAGGTAAACCAAAAAAAAAAAAGCTTTTCTCTTTGCGTCTTTG
ATTACTTAAAAAACAATCCGAGAATAACGATGAAGTTATAAACTTGGTGTGTTCCTTTGCATAGTTCGTTGCCTTTGTCCGTACAC
ACGTTGTTTGTTTAATCGGTTTCTCAAGTTGTTTTGTTTAATAAACTGACTTGTTGATCCGGAAACGAGTTAACAAAAAAGAGTTA
GTTTCCGATGTTGCAAAAAATGGTTAATTATGGATCTGTTAGTGTTAATTTTTGGGTTAAAAAGTTTGTTTATTTTGTATCTCTCT
CTCTCTCTCTTATTAACTAACAAACTCCTTTCCTTCTCTCCTGTCTGCTTATAGTTTCTGCAGTTATGAACTTTCTGTTTTTTCTT
TCATGTATATGCTTATGTATACCTTCATTCACAAGCAAAGATTCATCCGGGATCTCAATAAGTTTCTTCAATTTTTCTTTTTTTTT
GCAGTGAGATCGATCGAGCGGGAAAGATTATTATTTATATTGCCATGGGAGATGATGAGCAGTCTCACCTCAAATTCACCCTTCTG
CTCGAATCAGCAGCCTCCAATGATCTCTCCGGCTTCAAGTCACTAATCGAAGAAGAGGGTCTCGATACCGTTGATCGGTCTGGTTT
GTGGTACGGGAGGAGGTTAGGAACAACGAAGATGGGTTTCGAAGAGAGAACTCCTCTTATGATTGCCGCCCTTTTCGGAAGC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_200670 zinc finger CCCH domain-containing protein 66 [Arabidopsis thaliana] | 301 | 2e-025 |
| XP_002864583 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 291 | 3e-024 |
| XP_002314096 predicted protein [Populus trichocarpa] | 215 | 2e-015 |
| XP_002525655 transcription factor, putative [Ricinus communis] | 214 | 2e-015 |
| XP_002299802 predicted protein [Populus trichocarpa] | 213 | 3e-015 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LUZ4 Zinc finger CCCH domain-containing protein 66 | 301 | 9e-027 |
| Q93ZS9 Zinc finger CCCH domain-containing protein 47 | 191 | 5e-014 |
| Q9XEE6 Zinc finger CCCH domain-containing protein 29 | 185 | 3e-013 |
| P93755 Zinc finger CCCH domain-containing protein 30 | 138 | 7e-008 |
| Q9LXV4 Zinc finger CCCH domain-containing protein 56 | 136 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HP30 Predicted protein | 215 | 1e-015 |
| B9SI36 Transcription factor, putative | 214 | 2e-015 |
| B9GIG9 Predicted protein | 213 | 2e-015 |
| A5BAL2 Putative uncharacterized protein | 208 | 8e-015 |
| B9HSM9 Predicted protein | 203 | 3e-014 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G58620.1 zinc finger (CCCH-type) family protein | 301 | 8e-028 |
| AT3G55980.1 SZF1 (SALT-INDUCIBLE ZINC FINGER 1); transcription factor | 191 | 5e-015 |
| AT2G40140.1 CZF1; transcription factor | 185 | 2e-014 |
| AT2G40140.2 CZF1; transcription factor | 185 | 2e-014 |
| AT2G41900.1 zinc finger (CCCH-type) family protein | 138 | 7e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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