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Information for unigene UN82906

FASTA Sequence
Unigene ID: UN82906Length: 671 SSR 
CTCTCTCTCTCTTTCTCTCTCTCTCCCTTCCCCCTCTGACCAAAATTCCACAGATTCCGTCATGTCCTCCGACGGAAACTTAACCG
CCACGGCGGTTGAAAAGATGTTCTTCTGTTACCAGTGCAACCGCACAGTCAACATCTCAATCTCCCCCACATCCGATCCCTTCTGC
CCTCTCTGCTCCGGCGGGTTTCTCGAAGAATACGACGAGCCAAACCCTAATCCACCCCCATATCTCCATCCCGGCGGAGGAGGAGG
AGGAGGAGGTTTCTTCCCCATGGCCGATCCTTTCTCCACCTTACTCCCTCTCCTATTCGGCTCCTCCTCATCCTCCAACGTAGCCC
CGAGCTTCTTCAGCCCTCAGCCACGCTCCTCCACCGCGCAGAACAACGACGACGAAGCTTTCGATCCGGTGTCGTTTCTCCAGAAC
CACCTCCAGCATCTCCGATCCAGCGGCACGCACGTGCAGTTCGTGATCGAGAATCATCCCTCCGATCCGTCGAGCCGAGTCCCGGG
GAACCTCGGGGACTACTTCTTCGGCCCTGGACTCGAGCAGCTGATCCAGCAGCTCGCGGAGAACGATCCCAACCGTTACGGAACCC
CTCCCGCTTCGAAATCGGCGATCGAGGGGCTTCCGACTGTTAAGGTGACGAAGGATATGATGAGGTCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB01310 unnamed protein product [Arabidopsis thaliana]7322e-075
XP_002883213 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]7241e-074
NP_188629 E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana]7222e-074
P0CH30 RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=RING finger protein 15771e-057
CAN79596 hypothetical protein VITISV_042386 [Vitis vinifera]4821e-046

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LT14 Genomic DNA, chromosome 3, P1 clone: MPN97321e-075
Q8LPN7 AT3g19950/MPN9_197222e-074
A5C2A6 Putative uncharacterized protein4821e-046
B9I4Z0 Predicted protein4613e-044
Q5VME8 Os06g0101300 protein3888e-036

Arabidopsis top hits (Blast detail)Scoree value
AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein7221e-076
AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein1978e-016
AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein1896e-015
AT1G50350.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G19950.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1753e-013
AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein1682e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  100%

Unigene Members