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Information for unigene UN83077
| FASTA Sequence |
| Unigene ID: UN83077 | Length: 735 |
SSR | | GCACCCTCTCTCTCTGTCTGTCTCGATCAGTTCTCATCAAGAAAGAGAGAGAGAGTTGGAAACATGGCTTCAACTTTCAGCGCAAC
GTCTTCAATGGGCTCATCCTTGGCTCCTCCGTCGAACAAACTATCATCTCTTGTCTCATCAAACTCTTTTGGAAAGAGTCTGAGTT
TTGCTCAGAGGAAAGCGAGGTTTCCCAAGATCTGCGCTGCTAAGGAACTGCATTTCAATAAAGACGGCACTGCTATCAGGAAGCTT
CAAGCTGGTGTGAACAAGCTTGCGGATCTAGTTGGAGTCACTCTAGGTCCTAAAGGCAGAAACGTTGTTCTTGAGAGCAAATACGG
TTCACCAAGAATCGTTAACGATGGTGTAACAGTCGCTAGAGAGGTGGAGCTTGAGGATCCAGTTGAGAACATTGGAGCTAAGCTAG
TGAGACAAGCTGCTTCCAAGACCAATGACTTAGCTGGTGATGGAACTACCACTTCCGTTGTTCTTGCCCAAGGTCTCATCACTGAA
GGTGTCAAGGTGGTCGCCGCTGGTGCAAACCCGGTGTTGATCACCAGAGGTATCGAGAAAACCACAAAAGCTCTCGTTGCCGAGTT
GAAGAAAATGTCAAAGGAGGTGGAAGATAGCGAGCTTGCAGATGTTGCAGCGGTTAGTGCAGGAAACAACTACGAAGTAGGCAACA
TGATCGCTGAAGCAATGGCCAAAGTTGGTCGCAAAGGTGTGGTCACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864459 ATP binding protein [Arabidopsis lyrata subsp. lyrata] | 1024 | 3e-109 |
| NP_001032083 TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] | 1023 | 3e-109 |
| BAF00280 RuBisCO subunit binding-protein beta subunit precursor [Arabidopsis thaliana] | 1023 | 3e-109 |
| BAB11583 RuBisCO subunit binding-protein beta subunit precursor; chaperonin, 60 kDa [Arabidopsis thaliana] | 1023 | 3e-109 |
| NP_187956 TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] | 911 | 3e-096 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P21240 RuBisCO large subunit-binding protein subunit beta, chloroplastic | 901 | 2e-096 |
| P21241 RuBisCO large subunit-binding protein subunit beta, chloroplastic | 892 | 2e-095 |
| P08927 RuBisCO large subunit-binding protein subunit beta, chloroplastic | 835 | 1e-088 |
| Q43831 RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) | 587 | 6e-060 |
| B0CFQ6 60 kDa chaperonin 1 | 543 | 7e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z361 AT5G56500 protein | 1023 | 2e-109 |
| Q0WRG9 RuBisCO subunit binding-protein beta subunit | 1023 | 2e-109 |
| Q9FHA9 RuBisCO subunit binding-protein beta subunit; chaperonin, 60 kDa | 1023 | 2e-109 |
| Q9LJE4 GloEL protein; chaperonin, 60 kDa | 911 | 2e-096 |
| B9DFS9 AT1G55490 protein | 901 | 3e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G56500.2 ATP binding / protein binding | 1023 | 1e-111 |
| AT5G56500.1 ATP binding / protein binding | 1004 | 2e-109 |
| AT3G13470.1 chaperonin, putative | 911 | 1e-098 |
| AT1G55490.1 CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding | 901 | 2e-097 |
| AT1G55490.2 CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding | 901 | 2e-097 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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