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Information for unigene UN83108

FASTA Sequence
Unigene ID: UN83108Length: 835 SSR 
CTTCCTCTTCCCCCTTTAATCTCCACCGCACTTCCTCCAAATTTCAGGTTTTTTTTCTTCTATCTCTCTCTCTCTCATTTAATATT
TGCGATTTCAATTGAAATAAAAGTTCAATTACTCTGAGAAATTGTTTTAACCGGCGCTGCTCCGAGTTATCCCTAATCGGTTTCGG
TGGTAGAGTTGTAAAGGCTTCTGAGCATTTTCATGGCGGAGATACAAACAAATGGGAGATCGTACGAGTCACTGTTGGAGAAGGTT
CTTTCAATGAACATTGTTTCTTCTGACTATTTCAAAGAGCTTTATGGTCTCAAGACTTATCATGAGGTCGTTGATGAAATCTACAA
CCAAGTTAGTCATGTCGAGCCCTGGATGGGTGGTAACTGCCGTGGTCCTTCCACTGCCTATTGTCTCCTCTACAAATTCTTCACCA
TGAAACTCACCGTCAAGCAGATGCACGGCCTCTTGAAGCACACTGATTCTCCTTACATCAGAGCGGTCGGATTCCTATATTTAAGA
TATGTTGCAGATGCAAAGACGTTGTGGACATGGTACGAACCATACATTAAAGATGATGAGGAGTTTGCACCAGGATCAAATGGACG
GGTGACGACCATGGGTGTTTACGTACGTGATTTGCTGCTTGGACTGTATTACTTTGATACATTGTTTCCACGTATCCCGGTACCTG
TGATGCGCCAGATTGTATCAAACCTTGAGAAGATGAATTTACCAACAAAACCATCTGGTTCAACGGGAGACATGTCTCGTGGCTCT
GAAGACACTGCGCGTCGTCCACCGTCAGTAAAAGCATCCCTCTCTGTTTCATTTGGGCAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870520 hypothetical protein ARALYDRAFT_915852 [Arabidopsis lyrata subsp. lyrata]10924e-117
NP_851101 pre-mRNA-splicing factor 38B [Arabidopsis thaliana]10881e-116
XP_002528504 protein with unknown function [Ricinus communis]9652e-102
XP_002327478 predicted protein [Populus trichocarpa]9446e-100
BAH00547 unnamed protein product [Oryza sativa Japonica Group]9331e-098

Swiss-Prot top hits (Blast detail)Scoree value
Q5VTL8 Pre-mRNA-splicing factor 38B3143e-028
Q80SY5 Pre-mRNA-splicing factor 38B3134e-028
Q6AXY7 Pre-mRNA-splicing factor 38B3134e-028
Q6P7Y3 Pre-mRNA-splicing factor 38B2812e-024

TrEMBL top hits (Blast detail)Scoree value
Q8RWB1 At5g3737010889e-117
B9SR85 Putative uncharacterized protein9652e-102
B9MX17 Predicted protein9444e-100
B7F7E9 Putative uncharacterized protein9338e-099
B8AYN3 Putative uncharacterized protein9338e-099

Arabidopsis top hits (Blast detail)Scoree value
AT5G37370.1 ATSRL1; binding10885e-119
AT5G37370.2 ATSRL1; binding10322e-112
AT5G37370.3 ATSRL1; binding5062e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  100%

Unigene Members