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Information for unigene UN83204

FASTA Sequence
Unigene ID: UN83204Length: 638 SSR 
GCGGTGATTAGGCTTTTTAAAGGGGATTATTGATTAGACGGACGAATAAACCAACTATTTGAACCGTAGACCAAGTTTTTGAAAAA
TGGTTTAAGAAAAATAGTTTAGTTTAGGTCTGATTTGCTGCGTGGTTGCAACTTTTTAATTAGTCTTATTGTTTTTGTGTGTGTGT
GTTTGTTTGATTAGTTCTTAGTGCTGGATGAGGCGGATAGAGTACTTGATGTTGGTTTCCAAGACGAGTTGCGCACCATCTTTAAC
TGTCTCCCCAAAACTAGGCAAACGTTGCTGTTCTCCGCTACGATGACAAGTAACTTGCAGACTCTGCTTGAGCATTCTTCAAACAA
AGCTTATTTCTATGAAGCCTATGAAGGGTTAAAGACTGTTGATACGCTTAAGCAGCAGTATATTTTCATAGACAAAGATGCGAAAG
AGCTTTATCTTGCCCACATCTTGTCGCAAATGGAAGACAAGGAGATTCGATCAGCCATGATTTTTGTCTCCACCTGCAGGTTTCCA
TATTCATAGCTTTTTTTTTACTGAGTTCATTCTATTAGTTTGTGATTCCATTTTGTAGGTTATGATTAGACATGGTTTGTGTGCTT
AGGACATGTCAAAGGTTGAGTTTTATGCTTGAAGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892900 hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp. lyrata]5081e-049
NP_173078 DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]5035e-049
XP_002513358 dead box ATP-dependent RNA helicase, putative [Ricinus communis]4426e-042
CAN65105 hypothetical protein VITISV_021046 [Vitis vinifera]4418e-042
CBI24175 unnamed protein product [Vitis vinifera]4418e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q9SA27 DEAD-box ATP-dependent RNA helicase 365032e-050
Q8L4E9 DEAD-box ATP-dependent RNA helicase 363724e-035
Q4FZF3 Probable ATP-dependent RNA helicase DDX492237e-018
Q55BR9 Probable ATP-dependent RNA helicase ddx492202e-017
Q9Y6V7 Probable ATP-dependent RNA helicase DDX492183e-017

TrEMBL top hits (Blast detail)Scoree value
B9RHY9 Dead box ATP-dependent RNA helicase, putative4424e-042
A5B008 Putative uncharacterized protein4415e-042
B9HI54 Predicted protein4102e-038
A2YP05 Putative uncharacterized protein3725e-034
C5X389 Putative uncharacterized protein Sb02g0403803653e-033

Arabidopsis top hits (Blast detail)Scoree value
AT1G16280.1 DEAD/DEAH box helicase, putative5032e-051
AT5G65900.1 DEAD/DEAH box helicase, putative1923e-015
AT3G18600.1 DEAD/DEAH box helicase, putative1672e-012
AT1G71370.1 DEAD/DEAH box helicase, putative1539e-011
AT5G51280.1 DEAD-box protein abstrakt, putative1441e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  100%

Unigene Members