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Information for unigene UN83387
| FASTA Sequence |
| Unigene ID: UN83387 | Length: 840 |
SSR | | GTTCCTATTTAATGGGATCTGTTCTAGTTGTACATTTCTGCACTCCCCATTTCCTTTTTCAGTACAACAAGCTTGCCCTTCTTTGT
GAGTGATAAAGAAGAAAAAAGAAAGACAATCTTCAAATGGACTGGAACTTCAAACTCAGCTCCTGTTCTTTCCCCGATTACGATGA
AGAATCTGTACCGGATTTAACTCCAATAGATGCCTTGGTTTCATTTGGTGGGTCATCATCATCATCACCAAGACTGGAGCCAAAAG
GAGAGTTCTCATTTGATCTGAAACTAGGAAGGAACATAGTAAACTCCTCCTCTGCGTTTGGTAATACAGAGCAAGTGACATGTCTA
AAGTGGAAAGAGAGTACCGCCTTGGCGAAACCAGAAGCTTCAAGAAGCTCTGGTTCGACCAAAAGGACAAGAGGGAATGCTACTGG
GAACAACCAGATCCCGCTTTGTCTTGTTGATGGATGTGATTCTGATTTTAGTAACTGTAGAGAGTATCATAAAAGACATAAGGTCT
GTGATGTCCATTCTAAAACTCCTGTTGTTACAATCAGTGGTGATAGACAGAGGTTTTGTCAACAATGCAGCAGGTTTCATGCTTTG
GAAGAGTTTGATGAAGGGAAGAGAAGTTGTAGGAAACGTCTTGATGGACACAATCGTAGAAGACGGAAGCCTCAGCCCGACCGTAT
CGCTTCACATGTGTTTCCAACTACATCTTTTGGGACCCCGAGCAGCTGGGGAAACGGTCTTGTGAGCTTAGCTATGGCCAATGGTT
CGAGTTACGGGGAGAACCAGATTAGCTATGCTGTTTCTTCTCCTGCAAAGCCCGGCATTATGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568731 squamosa promoter-binding-like protein 13 [Arabidopsis thaliana] | 702 | 7e-072 |
| XP_002865818 hypothetical protein ARALYDRAFT_918095 [Arabidopsis lyrata subsp. lyrata] | 700 | 1e-071 |
| AAM61173 unknown [Arabidopsis thaliana] | 656 | 2e-066 |
| ACL51016 squamosa promoter-binding protein [Citrus trifoliata] | 462 | 5e-044 |
| XP_002318746 hypothetical protein POPTRDRAFT_570289 [Populus trichocarpa] | 450 | 1e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LFW6 Squamosa promoter-binding-like protein 13 | 702 | 3e-073 |
| Q0J0K1 Squamosa promoter-binding-like protein 18 | 424 | 6e-041 |
| Q6YZE8 Squamosa promoter-binding-like protein 16 | 404 | 1e-038 |
| Q2R3Y1 Putative squamosa promoter-binding-like protein 19 | 367 | 2e-034 |
| Q0JGI1 Squamosa promoter-binding-like protein 2 | 367 | 2e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DI20 AT5G50570 protein | 702 | 5e-072 |
| B8Y9B2 Squamosa promoter-binding protein | 462 | 3e-044 |
| B9I3U3 Putative uncharacterized protein | 450 | 8e-043 |
| B9RAD2 Squamosa promoter-binding protein, putative | 441 | 9e-042 |
| B9IFE1 Putative uncharacterized protein | 433 | 8e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G50570.1 squamosa promoter-binding protein, putative | 702 | 3e-074 |
| AT5G50670.1 squamosa promoter-binding protein, putative | 702 | 3e-074 |
| AT5G50570.2 squamosa promoter-binding protein, putative | 702 | 3e-074 |
| AT1G20980.1 SPL14 (squamosa promoter binding protein-like 14); DNA binding / transcription activator/ transcription factor | 353 | 9e-034 |
| AT2G42200.1 SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9); transcription factor | 350 | 2e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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