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Information for unigene UN83438
| FASTA Sequence |
| Unigene ID: UN83438 | Length: 853 |
SSR | | CAATAACATTCTTCCTTGGAATGGACTTTTCTAATTGACAAAGTCTTCTTCTTTCACACACACACACACACACACATGAAATAGGA
TTACAGACAAACAGAAATCAAAACAGGAAGGCAGAAAAGCTTTTTTTGACAATTTTCGTTTTATAGGGGACGACTTATAATAGCTG
ATCAAGTAGAACTAGAACCATTGTCATTATTAGGATGAGACCACCTCCTGAATCTGCAACTTACTAAGTTCCTTCCAGCAAAGAAC
CCAAACTTTGACCTAATCGTCGCTAATCTACTTCCTCCATTATTGCTACCTCCACCACCACCGTTACCTGAACCAACAATCTCCGC
CGCTCCACCCACCCTCGCCTCCTCCACCACCGCTGTTTCACTCTCACCATCAACCGCTACCGTTGCTTCCGTTTCATCACCATCCA
TACTCACCACAAGCGTCCTCCTCTGTTCCCTAAGCCACTCTCCAATCTCTCCAGTCACCACTTTACATTTCTTCACCTTCAGCTTC
ACCAGGTTAGGACACCCAGCAGCTAGCGCCTCGATCCCTAGATCCGAAACCGCACATCCTTTGATACAGAACTTCCTCAACGCCCC
GCATTTCTTAGCGATGCAAGCGATCTCCGTATCCCCTATCGTTCCACTCCCGCATAGCGCTAGCCTCTCGAGTTTCTCGCAGTTCG
AAGCAATGGCTGATATACTCTTGTGCGTTGCGTTCACACCGATCAGCACTAGCTCTTGCAAGTTCAAGCAGTGCCTAGCTACAGCC
AGCAGACCTTCGTCGCCAATCTTATTAGTCCTCCAACCATCTATATGAAGCTTCCTCAGCAGCTTGCATCTCTCGGCGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865015 hypothetical protein ARALYDRAFT_919984 [Arabidopsis lyrata subsp. lyrata] | 952 | 8e-101 |
| NP_569047 F-box protein SKIP2 [Arabidopsis thaliana] | 921 | 3e-097 |
| BAE98487 hypothetical protein [Arabidopsis thaliana] | 920 | 4e-097 |
| NP_566928 F-box/LRR-repeat protein 16 [Arabidopsis thaliana] | 728 | 7e-075 |
| XP_002876014 vier F-box protein 2 [Arabidopsis lyrata subsp. lyrata] | 724 | 2e-074 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FE83 F-box protein SKIP2 | 929 | 2e-099 |
| Q9SN10 F-box/LRR-repeat protein 16 | 728 | 3e-076 |
| Q9S9X4 Putative F-box/LRR-repeat protein 8 | 560 | 1e-056 |
| Q9C626 F-box protein At1g47056 | 492 | 7e-049 |
| Q9C5D2 F-box/LRR-repeat protein 4 | 159 | 3e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A3KPF1 At3g50080 | 728 | 5e-075 |
| B9SFZ9 Skip-2, putative | 634 | 4e-064 |
| Q84QE1 Avr9/Cf-9 rapidly elicited protein 189 | 623 | 7e-063 |
| A5BCN7 Putative uncharacterized protein (Fragment) | 606 | 7e-061 |
| B9R772 Skip-2, putative | 605 | 9e-061 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G67250.1 SKIP2 (SKP1/ASK1 INTERACTING PROTEIN 2); ubiquitin-protein ligase | 933 | 5e-101 |
| AT3G50080.1 VFB2 (VIER F-BOX PROTEINE 2); ubiquitin-protein ligase | 728 | 3e-077 |
| AT4G07400.1 VFB3 (VIER F-BOX PROTEINE 3); ubiquitin-protein ligase | 560 | 9e-058 |
| AT1G47056.1 VFB1 (VIER F-BOX PROTEINE 1); ubiquitin-protein ligase | 492 | 7e-050 |
| AT4G15475.1 F-box family protein (FBL4) | 159 | 3e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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