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Information for unigene UN83480

FASTA Sequence
Unigene ID: UN83480Length: 839 SSR 
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGTTTACATCTTTGACGAACAATCCTTTGGATCTTGTTCTGGAAGATTGATCATTATTAATATGTTCTAGAAAACCTTCGTTTT
ATCACTTTCTTTATAAAACACTGGAAGTTTATTAACTTATAGGGTTTTCGATCGTATTATTTGGTAGATCGTCGCCATTAAAAAGA
ATAAATCTGTTTTCCCCTTGTTTTTATTGTTCAATATCTTTCATAAACTACCCTCTTTTCTTGAAACTGTATTAAAGAAAATTTCA
ATGGAAACAATATCAGTGCAACGTTCGTCACCGGGTAAGCAGGTTTCTGGTATGAGGCCATTCAAGAACCCAAGAAGAAGGAGTTC
TCGTGGTTCTCTTTCGAGATCCGGAGGAAGTTTGGTAATCCCTACTAACCCAGCCTCGTCTTGGGGATCTTCGTCGGCGTATCCTC
CGCCGCCTTCAAACTACTCGCAGCCTCCTCTTCTCCCTCTTCCACGTGTCAACAGCTCAACTCTTCCTCTGCAACGCGTCAACAGT
TCTCGCACACGTGTGAACAGCTCTACTCTTCCTTGCGCTCAGACAAGAGCAACGTCCACTGAAACACAGCAGAAGAAAGTAAACTA
TGTTGAATCTGTACCGAGATTGACTAGAACCGGCTCGGTTCCGGTCTGGTCTAACCACCCGCGTGATTTCCCTAAAGGATTTGATG
GTTATCCTGGTCCAGCAATCTTGCTGCTATCTCCTCCACCGAGTAGTTTGCCGATGCCCAAGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893088 hypothetical protein ARALYDRAFT_889451 [Arabidopsis lyrata subsp. lyrata]6212e-062
NP_173435 uncharacterized protein [Arabidopsis thaliana]6094e-061
XP_001077495 PREDICTED: nuclear receptor co-repressor 1 [Rattus norvegicus]1642e-009
XP_577103 PREDICTED: nuclear receptor corepressor 1 [Rattus norvegicus]1642e-009
XP_002644657 Hypothetical protein CBG14637 [Caenorhabditis briggsae]1571e-008

Swiss-Prot top hits (Blast detail)Scoree value
P49756 RNA-binding protein 251503e-009
B2RY56 RNA-binding protein 251503e-009

TrEMBL top hits (Blast detail)Scoree value
Q9LNT3 Putative uncharacterized protein At1g200706093e-061
Q8VZY3 Cytochrome P450-3 (Fragment)1578e-009
A9UX47 Predicted protein1551e-008
Q5CMU2 Cdc2-related protein kinase1551e-008
A9VAD6 Predicted protein1542e-008

Arabidopsis top hits (Blast detail)Scoree value
AT1G20070.1 unknown protein6092e-063
AT2G03150.1 emb1579 (embryo defective 1579); binding / calcium ion binding1271e-007
AT2G01460.1 ATP binding / kinase1163e-006
AT5G37370.1 ATSRL1; binding1153e-006
AT5G37370.2 ATSRL1; binding1153e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  100%

Unigene Members