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Information for unigene UN83730
| FASTA Sequence |
| Unigene ID: UN83730 | Length: 841 |
SSR | | TCTCCGTACCGGCGGCGTAGTAGATCCAAATCCAAATCCAAAAGACAAAAGCTTATTCAGAATCAACCTCTGTGTCAAGAGACAGA
AGAGGAGGTAGAAGAAGAAGAAGAAGATGAAGGAAACGGTTTCAAGCTGAAAACTTCAGCCAAACACGGAGTCCAACCCCTCGGGA
ACCTCTACTTCGTCAACAAGGGCGCGGTGAACGCGAGAAACACCGGTCTAGGTAACCTCCAGGTCCTCACCGACGAGCTCGTTCTA
GACATCTTAGCACTCCTCGACGCAACTCATCTCGGTGTTTTAGCCACCGTGACCAAATCTCTCTACGTCTTCGCGAACCACGAGCC
TCTCTGGAGAAACCTCGTCCTGGAAGAGCTAAAAGGCGAGTTCTTGTTTACCGGGTCGTGGAAATCAACCTACGTAGCTTCTTCTT
CACGTCCGAAGATTCAGAAAAAATCTGGTGAATCGGTTTTGAAGATTAGAGATTTCTATTCTGATCACCTCTTCCAGAGCTGGCTC
TGCGCGAATCTCGAGATGAAGCATGAGTGGCTCGAGAGAGATAACATCGCACGTGTGAGTGGCGTCTCCGTCGAGGAGTTTATCGA
AAAGTTTGAGGAACCTAATAAGCCTGTTCTGTTGGAAGGTTGTCTGGATGATTGGGGTGCGGTTACGAAATGGACCAAGGAGTATC
TCACTAAAGTGTCTGGTGATGTAGAGTTCGCTGTCGGTCCGGTTGAGATGAAGCTCGAGAATTACTTTAGGTACTCTGATGGAGTC
ACCGAAGAGAGGCCGTTGTACTTGTTTGATCCCAAGTTTGCTGAGAAAGTCCCCGTCTTGGACTCGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB11404 unnamed protein product [Arabidopsis thaliana] | 1064 | 8e-114 |
| NP_196273 uncharacterized protein [Arabidopsis thaliana] | 1064 | 8e-114 |
| XP_002873265 hypothetical protein ARALYDRAFT_487465 [Arabidopsis lyrata subsp. lyrata] | 1058 | 4e-113 |
| XP_002524104 transferase, transferring glycosyl groups, putative [Ricinus communis] | 916 | 1e-096 |
| XP_002269129 PREDICTED: hypothetical protein [Vitis vinifera] | 883 | 7e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q67XX3 F-box protein At5g06550 | 1064 | 3e-115 |
| Q9M9E8 F-box protein At1g78280 | 205 | 1e-015 |
| Q6PFM0 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 | 187 | 2e-013 |
| Q9VD28 Bifunctional arginine demethylase and lysyl-hydroxylase PSR | 184 | 4e-013 |
| Q6GND3 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A | 176 | 3e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SDN5 Transferase, transferring glycosyl groups, putative | 916 | 8e-097 |
| A5BXV5 Putative uncharacterized protein | 883 | 5e-093 |
| B6SW66 Putative uncharacterized protein | 705 | 2e-072 |
| C5Y4W2 Putative uncharacterized protein Sb05g022250 | 698 | 1e-071 |
| Q2R2A5 Os11g0572800 protein | 677 | 4e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G06550.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell surface receptor linked signal transduction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transferase, transferring glycosyl groups (TAIR:AT1G78280.1); Has 1299 Blast hits to 1289 proteins in 204 species: Archae - 0; Bacteria - 195; Metazoa - 777; Fungi - 106; Plants - 94; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). | 1064 | 3e-116 |
| AT1G78280.1 transferase, transferring glycosyl groups | 284 | 9e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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