Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN83841

FASTA Sequence
Unigene ID: UN83841Length: 850 SSR 
AGCAGTTGAATTTATAGATTAAAGACCAGAACTTTTGTATGATATTGATGATCATAATGCTCAAAATTATCTCTTAAGTTGGAGAT
ATGTATGAGGAGAAAACAACAATAAGAAACATAAAAACAAAATCCATTGTCTGGTTTATTAGTAGCAAATAACAGAAAAAAGAAAA
AAAAAACAAAAAAAGAAGAGATGAGATATTGCAAGTAATATACTTTTCAAGGCAAAGAGACTCAGAGAGACCAGTTGTTATGGTGT
GAAGAAGAGTCATAATCCCTTGTGTTCTCATCTTCCATGTACTGCCTCCTGTTCTGATGATGATGATGATGGTCAGATAACTCAAA
CTCACCCATTGTTGTTCCACCACTTGTATGGTAATTATCTGACTCGGTGAACCGGCCCAAATTCAAAACAGGAGACATATCATTCG
GACAGTTATTATCATCGTCCTTGAAGACCCAAGGCGGGTTCAGATACTGATGCTGGCTAGGCGCAGGTGGTGGCTGAGCCATTGTA
ACCGTCATCGGGCCAAAACCCGAAGAAGTTCTCCATGTGTTGTTGTTGTTGATGTTGTTGTCTTGTGGCTGATGTGGATTTGACAG
AAGAGAGAGAGCACAGTTTGAGTCGCTGCCAATTCCCTTGTAGCTCTCTGGTTTAGTTTCCATAATATCTGGTGATGAGAAGCTTA
TCCCTCCTCCACTTACTGATCCTTGACTAAACACATTCATTGGATTGATCTGCCATGATGGTGCTGCCACTTGCCGTCTCATCGCT
CTTGTATCTAACGTTCTTGAACTTGTCCACCCCATATCTTGTGAACCAAGAAGCTCCCATTCATTGTAGTTTCAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34624 unnamed protein product [Thellungiella halophila]8972e-094
NP_181749 squamosa promoter-binding-like protein 9 [Arabidopsis thaliana]8416e-088
CAG25585 putative squamosa-promoter binding protein [Arabidopsis thaliana]8381e-087
XP_002879972 hypothetical protein ARALYDRAFT_903568 [Arabidopsis lyrata subsp. lyrata]8381e-087
AAK76681 putative squamosa-promoter binding protein [Arabidopsis thaliana]8353e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q700W2 Squamosa promoter-binding-like protein 98413e-089
Q9M2Q6 Squamosa promoter-binding-like protein 152831e-024

TrEMBL top hits Scoree value
No hits found  

Arabidopsis top hits (Blast detail)Scoree value
AT2G42200.1 SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9); transcription factor8422e-090
AT3G57920.1 SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15); DNA binding / transcription factor2849e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  100%

Unigene Members