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Information for unigene UN83908

FASTA Sequence
Unigene ID: UN83908Length: 839 SSR 
CGATTCGAATCGATTTTTCTCAATCCTCAAATTCGCAAATTCAACAAATTCGCAATGGATGATAGCTGTGCCGTCTGCGCCGACAA
TCTCGAATGGGTTGCCTACGGATCTTGTGGCCACCGAGAAGTCTGCTCCACATGCGTCGTCCGTCTCCGTTTCGTCCTCGGCGATC
CTCGCTGCTGTATCTGCAAAACCGAGTCCCCTGTCATCTTCGTCACCAAGGCGTTGGGTGATTACACGAGGACGATCAACGACTTC
TCGACGTTCCCGCCAGCGCCAAAGGAAGGCCGAGTGGCGGGAGGGTTCTGGTACCATGAAGACACTCAGGTCTTCTTTGATGACTT
GGATCAGTACAGGATGATCAAGGCCATGTGTAGGCTCTCCTGCAGTGTCTGTGACAAGGCGGCGGTGGAGGAGGAGCAAGGAGGAG
GAGGAGGGCCGAGGCATCGTTTGAGGATTAAGAGCGTTGAGCAGTTGAAGGGTCATTTGTATCATAAGCACAAATTGAATATGTGT
AATTTATGTCTCGAAGGGCGTAAGATATTCATAGGTGAACAGAAGTTGTATACGAGGGCGCAGCTTAACCAACATATACACACTGG
TGACTCTGAAGTTGATGGGAGTGAGAGTGAAAGAGGAGGGTTTGCTGGACATCCTATGTGTGAATTCTGTAGGAATCCTTTCTATG
GTGATAATGAGTTGTATACTCACATGACTACTGAGCATTATACCTGTCACATTTGCCAAAGGTCGCAAACAGGGAAATATGAGTAC
TATAGAAACTATGATGACTTGGAGCTTCACTTTCGTCGTGACCATTTCCTTTGTGAGGACGACTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878444 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]12807e-139
NP_191783 RING/U-box domain-containing protein [Arabidopsis thaliana]12753e-138
XP_002882106 nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]10971e-117
NP_001055084 Os05g0279400 [Oryza sativa Japonica Group]10952e-117
NP_566094 RING Zn-finger domain-containing protein [Arabidopsis thaliana]10943e-117

Swiss-Prot top hits (Blast detail)Scoree value
Q76PD2 LIM domain and RING finger protein C1223.012776e-024
Q05580 LIM domain and RING finger protein YDR266C2346e-019
Q86UK7 Zinc finger protein 5981648e-011
Q80YR4 Zinc finger protein 5981648e-011

TrEMBL top hits (Blast detail)Scoree value
Q9M1Q0 At3g6224012922e-140
B9I9D3 Predicted protein11131e-119
B8AW30 Putative uncharacterized protein11121e-119
Q0DJH5 Os05g0279400 protein11121e-119
O80716 Putative uncharacterized protein At2g4709010942e-117

Arabidopsis top hits (Blast detail)Scoree value
AT3G62240.1 zinc finger (C2H2 type) family protein12921e-142
AT2G47090.1 nucleic acid binding / protein binding / zinc ion binding10941e-119

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  100%

Unigene Members